PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746773.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 631aa MW: 72159.3 Da PI: 7.2467

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.2	1.4e-15	114	172	2	65
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 W+++evl+L+++r++m++++ + We vs+k++e gf+rs+++Ckek+e+ ++++ i XP_022746773.1 114 WSNDEVLVLLRIRSSMDNWFPEF-----TWENVSRKLAELGFKRSAEKCKEKFEEESRYFNSIS 172 ******************998.....9*****************************9876 PP
2	trihelix	95	7.2e-30	496	584	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++evlaLi++r + ++ +k k+plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql XP_022746773.1 496 RWPRDEVLALINLRCTLYNNGYHDKvgstIKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SLDSRTCPYFHQLS 584 8************9999999864444499***************************************8.9999******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MFDGVPDQFH QFIASTAAAA RTTTLPLPLS FPPIHNLASS NGFTSFDPLF TSNSHHHQVS 60 PQLQQPHFLH PLHHQHQPGQ KNEEKEENTR LVTMNMEIDR ERSMSDPIDN HLPWSNDEVL 120 VLLRIRSSMD NWFPEFTWEN VSRKLAELGF KRSAEKCKEK FEEESRYFNS ISCSKNYRIF 180 SELEELCQGE NPPDHQHHHR QQVVAAEKNK KVEKSREDED NIGQNLEDDP RNIDEYQTSA 240 GNNASYQDNE KVVENKANNN KGSNKERKRQ KEFEMIKGFC EDIVNKLMTR QKEMHNKLID 300 DMVKRDEEKV AKEEAWKKQE LDRIDQELGL RAKEQAVEGD RQATIIKFLS EFSSAGSYKK 360 QCFGRSNIED LVKVPNEHSN PPNNSSSSLV PAAQNPNHIV NNQNKVDQVS TMIIGHQNFG 420 SCPTRNNQIK PISMAENQAP QNPNLKIPTS SAQALAPQNP NSVNAQSNPL PPTSPFTVNK 480 ATQNPTPNDK EDFGKRWPRD EVLALINLRC TLYNNGYHDK VGSTIKAPLW ERISQGMLEL 540 GYKRSAKRCK EKWENINKYF RKTKDVNKKR SLDSRTCPYF HQLSTLYNQG TLIAHPEGLE 600 NRSALPENHS DLPETGIDSS QKGAKNSSTS F

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MFDGVPDQFH QFIASTAAAA RTTTLPLPLS FPPIHNLASS NGFTSFDPLF TSNSHHHQVS  60
PQLQQPHFLH PLHHQHQPGQ KNEEKEENTR LVTMNMEIDR ERSMSDPIDN HLPWSNDEVL  120
VLLRIRSSMD NWFPEFTWEN VSRKLAELGF KRSAEKCKEK FEEESRYFNS ISCSKNYRIF  180
SELEELCQGE NPPDHQHHHR QQVVAAEKNK KVEKSREDED NIGQNLEDDP RNIDEYQTSA  240
GNNASYQDNE KVVENKANNN KGSNKERKRQ KEFEMIKGFC EDIVNKLMTR QKEMHNKLID  300
DMVKRDEEKV AKEEAWKKQE LDRIDQELGL RAKEQAVEGD RQATIIKFLS EFSSAGSYKK  360
QCFGRSNIED LVKVPNEHSN PPNNSSSSLV PAAQNPNHIV NNQNKVDQVS TMIIGHQNFG  420
SCPTRNNQIK PISMAENQAP QNPNLKIPTS SAQALAPQNP NSVNAQSNPL PPTSPFTVNK  480
ATQNPTPNDK EDFGKRWPRD EVLALINLRC TLYNNGYHDK VGSTIKAPLW ERISQGMLEL  540
GYKRSAKRCK EKWENINKYF RKTKDVNKKR SLDSRTCPYF HQLSTLYNQG TLIAHPEGLE  600
NRSALPENHS DLPETGIDSS QKGAKNSSTS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	1e-76	Trihelix family protein