PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746775.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 490aa MW: 55626.8 Da PI: 5.7843

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.5	9.7e-25	115	214	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+++v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++ XP_022746775.1 115 KWTDSMVKLLIMAVYYIGDEAGSEGndptgkkkaggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSL 209 7************99888875433677778999999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_022746775.1 210 LDTMD 214 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MDTSGLPGGT FSGIGSGMLG LEMSLQPQQQ QQQQPPQNPQ SDQNPHHLPH QPQMIAYSHH 60 ETDHSQHQQS VKQGYPFASK TKQLSPLSDE DEPGFPPDDC AADAKKKFSP WQRMKWTDSM 120 VKLLIMAVYY IGDEAGSEGN DPTGKKKAGG LLQKKGKWKS VSRAMMEKGF YVSPQQCEDK 180 FNDLNKRYKR VNDILGKGTA CRVVENQSLL DTMDLSPKMK EEVRKLLNSK HLFFREMCAY 240 HNSCGHGATA GASGANHSPE VAIETSQIQH HQAQQQRCLH SSDNAQISGN LGRIEAEAMK 300 LAKVGSEEED DDEDDDSDDD EEEDEDDDDE EAMDGYSRGQ SGHAQEDDED NDEKSSHKRP 360 RKVPFAMSLS PLIQQLSCEV VNVIQDGSKS ACEKKHWMKM RLMQLEEQQV SYQHQAFELE 420 KQRLKWMKFS GKKEREMERA KLENERRRLE NERMVLLVRR KELELVELLH HNQPQQHSSN 480 KRGDPSSITG

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MDTSGLPGGT FSGIGSGMLG LEMSLQPQQQ QQQQPPQNPQ SDQNPHHLPH QPQMIAYSHH  60
ETDHSQHQQS VKQGYPFASK TKQLSPLSDE DEPGFPPDDC AADAKKKFSP WQRMKWTDSM  120
VKLLIMAVYY IGDEAGSEGN DPTGKKKAGG LLQKKGKWKS VSRAMMEKGF YVSPQQCEDK  180
FNDLNKRYKR VNDILGKGTA CRVVENQSLL DTMDLSPKMK EEVRKLLNSK HLFFREMCAY  240
HNSCGHGATA GASGANHSPE VAIETSQIQH HQAQQQRCLH SSDNAQISGN LGRIEAEAMK  300
LAKVGSEEED DDEDDDSDDD EEEDEDDDDE EAMDGYSRGQ SGHAQEDDED NDEKSSHKRP  360
RKVPFAMSLS PLIQQLSCEV VNVIQDGSKS ACEKKHWMKM RLMQLEEQQV SYQHQAFELE  420
KQRLKWMKFS GKKEREMERA KLENERRRLE NERMVLLVRR KELELVELLH HNQPQQHSSN  480
KRGDPSSITG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	5e-75	Trihelix family protein