PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746795.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 169aa    MW: 18623.1 Da    PI: 6.8976
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601261.8e-39111101100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+l+r+C+++C++apyf ++++kkfa vhk+FGasnv+k+l ++pee+re++++sl+yeAe+r+rdPvyG++g i  lq ++ +l+++la
  XP_022746795.1  11 SCAACKLLKRRCSSNCIFAPYFRSDESKKFAKVHKVFGASNVSKILIEVPEEQREETVNSLAYEAEVRLRDPVYGCIGAIALLQTKMIELQHDLA 105
                     6********************************************************************************************** PP

          DUF260  96 llkee 100
                     l++++
  XP_022746795.1 106 LARAR 110
                     99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MRGHEPRSSS SCAACKLLKR RCSSNCIFAP YFRSDESKKF AKVHKVFGAS NVSKILIEVP  60
EEQREETVNS LAYEAEVRLR DPVYGCIGAI ALLQTKMIEL QHDLALARAR LARYAATSSV  120
VSDNDGASMG PFGDFPAACG GFIDSFSQNI SSEVNQDAHM YDFSQIPYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.12e-66LBD family protein