PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746831.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 477aa    MW: 54278.6 Da    PI: 6.8417
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS441.84.9e-135454711373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA++v++g+le+a+ +L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s  ++see+ ++klf+e++Pilk+++
  XP_022746831.1  45 LIHLLVACANHVAAGSLENANIYLEQISQLASPDGDTMQRIAAYFTEALADRMLKAWPGLHKALNSTKIS--SVSEEFLVQKLFFELCPILKLAY 137
                     689*************************************************************999998..599******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI+ea+ege++vHiiD+   +++QW++L+q+++sRpegpp+lRiTg+++    +ke l++++ rL++ Ae+l++pf+fn+ ++ rle+l+
  XP_022746831.1 138 IITNQAIVEAMEGEKMVHIIDLYSFEPAQWINLFQTFSSRPEGPPHLRITGIHK----QKEVLKQMALRLTEEAEKLNIPFQFNP-IVCRLENLD 227
                     ******************************************************....9**************************.6889***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll...........................................................desvsles..er 224
                     le+Lrvk+gEalaV++vl+lh+ll                                                           ++++sl+   + 
  XP_022746831.1 228 LESLRVKTGEALAVSSVLELHSLLatddemlrrninspsvsknvnsnqshrvlqmnqrtfgewlqkepvhmyspssdlatpspSSPLSLAPapKL 322
                     *********************************************************************************99666666655567 PP

            GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                      ++L +++ lsPk++vv+eqe++hn+++++er +eal++y+alfd+l+++++r+ +er+kvE++l+g+ei+n++aceg er+ rhe+lekW  rl
  XP_022746831.1 323 WSFLTALRALSPKLMVVTEQESNHNGPTLMERAMEALNFYAALFDCLQSTVSRAPQERQKVEKMLFGEEIKNIIACEGLERKVRHEKLEKWILRL 417
                     89********************************************************************************************* PP

            GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     e a F  vpls++ + qa +ll++ + dgy+++ee+g+l+l W++rpL+s+SaW
  XP_022746831.1 418 ELASFLRVPLSYHGMLQAGRLLQTNNYDGYKIKEENGCLLLFWQERPLYSMSAW 471
                     ****************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MIQEGTSSVT SSPHQFFTWM SLSPGLGSPF PWPRELKSEE RGLYLIHLLV ACANHVAAGS  60
LENANIYLEQ ISQLASPDGD TMQRIAAYFT EALADRMLKA WPGLHKALNS TKISSVSEEF  120
LVQKLFFELC PILKLAYIIT NQAIVEAMEG EKMVHIIDLY SFEPAQWINL FQTFSSRPEG  180
PPHLRITGIH KQKEVLKQMA LRLTEEAEKL NIPFQFNPIV CRLENLDLES LRVKTGEALA  240
VSSVLELHSL LATDDEMLRR NINSPSVSKN VNSNQSHRVL QMNQRTFGEW LQKEPVHMYS  300
PSSDLATPSP SSPLSLAPAP KLWSFLTALR ALSPKLMVVT EQESNHNGPT LMERAMEALN  360
FYAALFDCLQ STVSRAPQER QKVEKMLFGE EIKNIIACEG LERKVRHEKL EKWILRLELA  420
SFLRVPLSYH GMLQAGRLLQ TNNYDGYKIK EENGCLLLFW QERPLYSMSA WGFRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein