PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746872.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 345aa MW: 38213.3 Da PI: 7.1529

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.6e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_022746872.1 14 KGPWSPEEDAKLKEYIEKHGTGaNWIALPQKAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36.6	1.1e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed l+ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022746872.1 69 GEFSDDEDRLICTLFSSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KHGTGANWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRLIC TLFSSIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLFGM 120 VPQSQRKTHH IHNASFSSLL QSFSPPSPSP SPSLPSPSPS STILYNCNNN TYHTPGRSFP 180 NFEVSYSSSF SNSSASCITA ASVLQPPQET LLGPMKHYQL QDGLRKFGGE ASCSSSDGSC 240 SNQISKTKEL ENEYGGATGN NGANNGDQQI GMHSYNFNNE ADENQKLMAS NGGEANEWSE 300 KSSNGLWDET PLDYGLEEIK QLISTTSCNS FSFDENKAEE KVMYY

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KHGTGANWIA LPQKAGLRRC GKSCRLRWLN  60
YLRPNIKHGE FSDDEDRLIC TLFSSIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLFGM  120
VPQSQRKTHH IHNASFSSLL QSFSPPSPSP SPSLPSPSPS STILYNCNNN TYHTPGRSFP  180
NFEVSYSSSF SNSSASCITA ASVLQPPQET LLGPMKHYQL QDGLRKFGGE ASCSSSDGSC  240
SNQISKTKEL ENEYGGATGN NGANNGDQQI GMHSYNFNNE ADENQKLMAS NGGEANEWSE  300
KSSNGLWDET PLDYGLEEIK QLISTTSCNS FSFDENKAEE KVMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-76	MYB family protein