PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746890.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 385aa MW: 41944.9 Da PI: 8.0283

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	118	163	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ XP_022746890.1 118 RGHWRPAEDSKLKELVAQYGPQNWNLIAEHLE-GRSGKSCRLRWFNQ 163 899***************************.*********996 PP
2	Myb_DNA-binding	57.7	2.8e-18	170	213	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022746890.1 170 KKAFTEEEEERLLAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 213 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSLQILTNDF KCYNGVVQEM NFLAPPAIFS HPIERDTKNS RMGFQISSSL MEQSNKCLSF 60 EPPESRGSKG VAACDGKVGF LGVEKSGLSL NLSGEDESNK NSGALGGTKI GHTKLCARGH 120 WRPAEDSKLK ELVAQYGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPSINK KAFTEEEEER 180 LLAAHRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EQSSIYRRRK PSSSSASQAL 240 PKGLDETIQN NACSDQSIIS SNIDESASTC TDLSLTPSSA KVPAGVCTFF SPVHQMGSSG 300 QKVVTRGNGD FDKFYGTGNV FYQQGPMGVV MGVDQSTHSS DSNSEVSPAE SVGTNRTNHS 360 MSGESGNGNE KINLPFIDFL GVGAS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSLQILTNDF KCYNGVVQEM NFLAPPAIFS HPIERDTKNS RMGFQISSSL MEQSNKCLSF  60
EPPESRGSKG VAACDGKVGF LGVEKSGLSL NLSGEDESNK NSGALGGTKI GHTKLCARGH  120
WRPAEDSKLK ELVAQYGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPSINK KAFTEEEEER  180
LLAAHRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EQSSIYRRRK PSSSSASQAL  240
PKGLDETIQN NACSDQSIIS SNIDESASTC TDLSLTPSSA KVPAGVCTFF SPVHQMGSSG  300
QKVVTRGNGD FDKFYGTGNV FYQQGPMGVV MGVDQSTHSS DSNSEVSPAE SVGTNRTNHS  360
MSGESGNGNE KINLPFIDFL GVGAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	9e-69	MYB family protein