PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746894.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 380aa MW: 40757.3 Da PI: 9.1304

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	139	1.3e-43	80	155	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022746894.1 80 RCQVEGCKVDLSDAKAYYSRHKVCAMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 155 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MEMGSGSLTD SGGSSTNSST ESLNGLKFGK KIYFEDAAAA DAVGATMGTP PKSGPGSSSS 60 SGSGRKVRVG GVVQGAHPPR CQVEGCKVDL SDAKAYYSRH KVCAMHSKSP KVIVAGLEQR 120 FCQQCSRFHQ LPEFDQGKRS CRRRLAGHNE RRRKPPPGSL LPSPYGRLSS SIIESGSRGG 180 SFIMDFTAYP RLSGRDAWPT ARSMERTPGN QNMAMGRSLP HPWQNNSENP PPDLFLHGSP 240 GGTGFSSTAI APGECFTGVD DSSCALSLLS NQPWGSRNRA SSLGVNDMMN TEGSSLAQLT 300 TPHSAVVNPY SNASWAFKGN NSGNSSNEMP PNLGLGQISE PVNSQFFGRP ELSQQNRRQY 360 MELEHSRSCD ISTQHVHWSL

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MEMGSGSLTD SGGSSTNSST ESLNGLKFGK KIYFEDAAAA DAVGATMGTP PKSGPGSSSS  60
SGSGRKVRVG GVVQGAHPPR CQVEGCKVDL SDAKAYYSRH KVCAMHSKSP KVIVAGLEQR  120
FCQQCSRFHQ LPEFDQGKRS CRRRLAGHNE RRRKPPPGSL LPSPYGRLSS SIIESGSRGG  180
SFIMDFTAYP RLSGRDAWPT ARSMERTPGN QNMAMGRSLP HPWQNNSENP PPDLFLHGSP  240
GGTGFSSTAI APGECFTGVD DSSCALSLLS NQPWGSRNRA SSLGVNDMMN TEGSSLAQLT  300
TPHSAVVNPY SNASWAFKGN NSGNSSNEMP PNLGLGQISE PVNSQFFGRP ELSQQNRRQY  360
MELEHSRSCD ISTQHVHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-60	SBP family protein