PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746928.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 738aa    MW: 83442.6 Da    PI: 6.3985
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS401.77.6e-1233647341373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+av+++d + a++lL+++++++sp gd mqR+a+yf+ +L+arla+s+++ y a+ ++ +s    ++ l+a++lf  ++P+ k+s+
  XP_022746928.1 364 LRTLLTLCAQAVAADDRRSANELLKQIRQHSSPMGDGMQRIAHYFVDGLEARLAGSGTQSYTAVITKVAS---AADILKAYHLFLAACPFKKISN 455
                     5789*********************************************************999888888...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N++I++ +e++ r+HiiDf+i +G+QWp+L++ L+sRp+gpp++RiTg++ p++g   +e++eetg+rLa++Ae+++vpfef++ +a+++++
  XP_022746928.1 456 FFSNKTIMNLAENAARIHIIDFGILYGFQWPCLIRRLSSRPGGPPKVRITGIDLPQPGfrPAERVEETGRRLANYAETFKVPFEFHA-IAQKWDS 549
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+Lr+++gE+l+Vn++++l +llde+v +es+r++vL+l+++++P+v+++   +  +n++ F +rf eal +ys+lfd+le+++pre  er+
  XP_022746928.1 550 IQIEDLRIDTGEVLVVNCIYRLRNLLDETVVVESPRNKVLNLIRKMNPDVFILGIVNGAYNAPFFITRFREALFHYSTLFDMLETNVPREIPERM 644
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +Ere++g+e++nv+acegaer+er et+++W+ r ++aG++ +pl+++++k ak  + +++ + + ++e++++l++gWk+r L+++S+W
  XP_022746928.1 645 LIEREIFGWEAMNVIACEGAERIERPETYKQWQVRNMRAGLRRLPLNKEIMKMAKERVDTCYHKDFVIDEDNHWLLQGWKGRILYALSSW 734
                     **************************************************************889************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MDRSLKGLNS SVDRVRLSDD TVLALSGPTF DNKFKNENYV DIPPLQPAPV LRNLTPSLSV  60
NEEGDSHDDY DFSDVVLKYI NQMLMEEDME DKTCMFKESS TVLQAAEKSF YEVLGERYPP  120
SPKYELKPYT DQNQESSDEI RDQSCWRCSS ASIGSSSHSC STLVDPGCNH DFGEQRSLNF  180
ASQANSSHSS RNSTGSVVDG FVDSLVSTLR LPVIFSNSES VMQFRKGFEE ASRFLPNVGS  240
LFVDVESDGL FLKELKEEVK DAVNKVEKNE FLQEGSRGKK NPYPEDVNLE SGRSNKQSLV  300
CTESTVSPEM FDKVLLNCQS VIDLQKALQN ETSKNVQQNG QLKGSTGGKT RGKKQGSKRN  360
VVDLRTLLTL CAQAVAADDR RSANELLKQI RQHSSPMGDG MQRIAHYFVD GLEARLAGSG  420
TQSYTAVITK VASAADILKA YHLFLAACPF KKISNFFSNK TIMNLAENAA RIHIIDFGIL  480
YGFQWPCLIR RLSSRPGGPP KVRITGIDLP QPGFRPAERV EETGRRLANY AETFKVPFEF  540
HAIAQKWDSI QIEDLRIDTG EVLVVNCIYR LRNLLDETVV VESPRNKVLN LIRKMNPDVF  600
ILGIVNGAYN APFFITRFRE ALFHYSTLFD MLETNVPREI PERMLIEREI FGWEAMNVIA  660
CEGAERIERP ETYKQWQVRN MRAGLRRLPL NKEIMKMAKE RVDTCYHKDF VIDEDNHWLL  720
QGWKGRILYA LSSWVPAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein