PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747005.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 233aa MW: 26318.1 Da PI: 8.4774

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	7.1e-13	63	109	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr+llP + K +Ka+ L k+v+ +k+L XP_022747005.1 63 KNHKEAEKRRRERINSHLNKLRSLLPCN-----SKTDKASLLAKVVQRVKEL 109 58***********************8.....7**********999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MQPENSELYR FLAQNGIGSY GFPANSEFPV VQSFSSSSTY YPLEMSGVTT ETTPQDRALA 60 ALKNHKEAEK RRRERINSHL NKLRSLLPCN SKTDKASLLA KVVQRVKELK QQALEITELE 120 TLPSETDEIT VLSCDYSCDG RLIFKASLCC EDRSDLLTEL IEILKSLHLK TLKAEMATLG 180 GRIRNVLIVA ADKDHSIESV HFLQNALKSL LERSNSSDRS KRRRVLDHKI IVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	225	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	1e-89	bHLH family protein