PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747019.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 477aa MW: 52277.8 Da PI: 6.9092

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57	5.3e-18	98	184	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a+ e+ ++l+rg l++ +Weev++++ r ++ ++s +qCk+k +nl+kryk ++++++++ + s++p+f+++e XP_022747019.1 98 EWSDAAIGCLLQAYMEKLTQLNRGHLRGRDWEEVAAAVseRCEKQSKSVEQCKNKVDNLKKRYKLERHRMSDGG-ITASHWPWFKKME 184 5***********************************777778899*********************95.55569*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MASSVDDDFS LLDDHQTNPT HHHPTYAQIH APPPDNHDAD DDSDSAFRDP DFGSNNNNNN 60 ATSSDIRIDK RRDQEEINDC VLKKPKQSTT EYRKDREEWS DAAIGCLLQA YMEKLTQLNR 120 GHLRGRDWEE VAAAVSERCE KQSKSVEQCK NKVDNLKKRY KLERHRMSDG GITASHWPWF 180 KKMEEIVGNS LPGKTVADED RGGASPGTAV RQPKSRYALA TSSPVGQIIS MKSKSPKWRR 240 VVFKISGAAL ACTGPHNIDP KVAMLIAREV AIACNLGVEV AIVVGGRNFF CGDTWVAATG 300 LDRSTAYQIG MMASVMNSIL LQSSLEKMGV QTRVQTAFSV QEVAEPYSRQ RAIRHLEKGR 360 VVIFGGIGAG IGNPLFSSDT AAALRASEIH AAAVLKGVNV DGVHDCHSQY NNATFEHISF 420 REFVSSGATA MDMMALTYCE ENGIPVVVFN LLQPGNISKA LCGDQVGTLI DQNGRTS

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MASSVDDDFS LLDDHQTNPT HHHPTYAQIH APPPDNHDAD DDSDSAFRDP DFGSNNNNNN  60
ATSSDIRIDK RRDQEEINDC VLKKPKQSTT EYRKDREEWS DAAIGCLLQA YMEKLTQLNR  120
GHLRGRDWEE VAAAVSERCE KQSKSVEQCK NKVDNLKKRY KLERHRMSDG GITASHWPWF  180
KKMEEIVGNS LPGKTVADED RGGASPGTAV RQPKSRYALA TSSPVGQIIS MKSKSPKWRR  240
VVFKISGAAL ACTGPHNIDP KVAMLIAREV AIACNLGVEV AIVVGGRNFF CGDTWVAATG  300
LDRSTAYQIG MMASVMNSIL LQSSLEKMGV QTRVQTAFSV QEVAEPYSRQ RAIRHLEKGR  360
VVIFGGIGAG IGNPLFSSDT AAALRASEIH AAAVLKGVNV DGVHDCHSQY NNATFEHISF  420
REFVSSGATA MDMMALTYCE ENGIPVVVFN LLQPGNISKA LCGDQVGTLI DQNGRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein