PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747020.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 476aa MW: 52190.7 Da PI: 6.9092

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57	5.3e-18	98	184	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a+ e+ ++l+rg l++ +Weev++++ r ++ ++s +qCk+k +nl+kryk ++++++++ + s++p+f+++e XP_022747020.1 98 EWSDAAIGCLLQAYMEKLTQLNRGHLRGRDWEEVAAAVseRCEKQSKSVEQCKNKVDNLKKRYKLERHRMSDGG-ITASHWPWFKKME 184 5***********************************777778899*********************95.55569*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MASSVDDDFS LLDDHQTNPT HHHPTYAQIH APPPDNHDAD DDSDSAFRDP DFGSNNNNNN 60 ATSSDIRIDK RRDQEEINDC VLKKPKQSTT EYRKDREEWS DAAIGCLLQA YMEKLTQLNR 120 GHLRGRDWEE VAAAVSERCE KQSKSVEQCK NKVDNLKKRY KLERHRMSDG GITASHWPWF 180 KKMEEIVGNS LPGKTVADED RGGASPGTAV RQPKRYALAT SSPVGQIISM KSKSPKWRRV 240 VFKISGAALA CTGPHNIDPK VAMLIAREVA IACNLGVEVA IVVGGRNFFC GDTWVAATGL 300 DRSTAYQIGM MASVMNSILL QSSLEKMGVQ TRVQTAFSVQ EVAEPYSRQR AIRHLEKGRV 360 VIFGGIGAGI GNPLFSSDTA AALRASEIHA AAVLKGVNVD GVHDCHSQYN NATFEHISFR 420 EFVSSGATAM DMMALTYCEE NGIPVVVFNL LQPGNISKAL CGDQVGTLID QNGRTS

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MASSVDDDFS LLDDHQTNPT HHHPTYAQIH APPPDNHDAD DDSDSAFRDP DFGSNNNNNN  60
ATSSDIRIDK RRDQEEINDC VLKKPKQSTT EYRKDREEWS DAAIGCLLQA YMEKLTQLNR  120
GHLRGRDWEE VAAAVSERCE KQSKSVEQCK NKVDNLKKRY KLERHRMSDG GITASHWPWF  180
KKMEEIVGNS LPGKTVADED RGGASPGTAV RQPKRYALAT SSPVGQIISM KSKSPKWRRV  240
VFKISGAALA CTGPHNIDPK VAMLIAREVA IACNLGVEVA IVVGGRNFFC GDTWVAATGL  300
DRSTAYQIGM MASVMNSILL QSSLEKMGVQ TRVQTAFSVQ EVAEPYSRQR AIRHLEKGRV  360
VIFGGIGAGI GNPLFSSDTA AALRASEIHA AAVLKGVNVD GVHDCHSQYN NATFEHISFR  420
EFVSSGATAM DMMALTYCEE NGIPVVVFNL LQPGNISKAL CGDQVGTLID QNGRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein