PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022747098.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 175aa    MW: 18867.7 Da    PI: 10.8359
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022747098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.62e-192558134
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                    C+ C+ttkTplWR gp g+k+LCnaCG++yrkk 
  XP_022747098.1 25 CTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKT 58
                    ********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MGVMDLRGKK SLGEDMMSGN NKKSCTDCKT TKTPLWRGGP AGPKSLCNAC GIRYRKKTKA  60
MLGLKRGSEK KKKERSQSSH STITTSSASI ATTDNVGESK KPSGKFNGLS ETTEMRLFAL  120
GSEVLLQRSS STTTNSSLSL SGVVKKQRCQ RRRKLGEEEQ AAFSLMALSC GSVFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15573RKKTKAMLGLKRGSEKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-16GATA family protein