PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747214.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 376aa MW: 41196.1 Da PI: 7.0036

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	81.6	8e-26	194	254	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +D +WrKYGqKe+ gs++pr+YYrCt++ +Cp+kk+v+r ++d +++++tY g+H+++ XP_022747214.1 194 EDNNTWRKYGQKEILGSRYPRAYYRCTHQklyNCPAKKQVQRLDNDFHTFKVTYIGHHTCH 254 69999**********************999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MFKSKEKQKH PETMEDTFSL ILHGCKLAKD LESNLGNLAN QPEILSKSCD DIIKIFVTAK 60 ERLNALDPAL FTHHLLRQPQ NSSSSSQQQL RTDPNLQEWL MYGGVITQAM DMVQQQLFAG 120 KTPLEINEMG GVGSAASAEL RSSIGGEIQA VDVSNSARAS SSSSQRPRRR KDDEEKNTIT 180 VAAPQIGNID VPPEDNNTWR KYGQKEILGS RYPRAYYRCT HQKLYNCPAK KQVQRLDNDF 240 HTFKVTYIGH HTCHMSSTAP SIPPPPPVIE TSRQNQMMVT DQPTVPTSSS SSVPLGLGRW 300 LSMEFSLGSG GSSSSGAAGG STTGNRYGRD IVDYPAVADM ADAMFNSGSS SSNSMDFIFP 360 SVEDKWEAGA GDKKNI

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MFKSKEKQKH PETMEDTFSL ILHGCKLAKD LESNLGNLAN QPEILSKSCD DIIKIFVTAK  60
ERLNALDPAL FTHHLLRQPQ NSSSSSQQQL RTDPNLQEWL MYGGVITQAM DMVQQQLFAG  120
KTPLEINEMG GVGSAASAEL RSSIGGEIQA VDVSNSARAS SSSSQRPRRR KDDEEKNTIT  180
VAAPQIGNID VPPEDNNTWR KYGQKEILGS RYPRAYYRCT HQKLYNCPAK KQVQRLDNDF  240
HTFKVTYIGH HTCHMSSTAP SIPPPPPVIE TSRQNQMMVT DQPTVPTSSS SSVPLGLGRW  300
LSMEFSLGSG GSSSSGAAGG STTGNRYGRD IVDYPAVADM ADAMFNSGSS SSNSMDFIFP  360
SVEDKWEAGA GDKKNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	171	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	2e-56	WRKY family protein