PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022747367.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 226aa    MW: 24857.1 Da    PI: 6.5692
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022747367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.13.3e-3971071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+ap+f+ ++ +++fa+vhk+FGasnv+kll +lp ++r+da+ ++ yeA ar+rdP++G+v++i++lqqq+++l++e+
  XP_022747367.1   7 SCGACKFLRRKCTTECVFAPHFCYDEaANHFAAVHKVFGASNVSKLLLHLPMHNRSDAAVTISYEALARLRDPIHGCVAHIFALQQQVANLQEEI 101
                     6***********************9878******************************************************************* PP

          DUF260  95 allkee 100
                     + l+++
  XP_022747367.1 102 EILNNQ 107
                     *99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSGLGSSCGA CKFLRRKCTT ECVFAPHFCY DEAANHFAAV HKVFGASNVS KLLLHLPMHN  60
RSDAAVTISY EALARLRDPI HGCVAHIFAL QQQVANLQEE IEILNNQMAN HAVEFPGCGN  120
HQAAVNSDGK KQSTSLHETM NTLYYQDEQA TLPNHPGFMT GNQILDSQLC ESFPGSYKRE  180
DQNILCTLYQ NPPEIKLEGV ESGILIDYPC MGNSGATANR KGPSWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.13e-57LBD family protein