PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022747385.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 217aa    MW: 23565.9 Da    PI: 7.2165
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022747385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260134.34.6e-42641631100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++C+lapyfp ++p kf ++h++FGasn++k l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q++ l+a+la
  XP_022747385.1  64 PCAACKILRRRCVEKCILAPYFPPSEPYKFTIAHRVFGASNIIKSLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSDLQAQLA 158
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022747385.1 159 KAQAE 163
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MENNVKAVIS PISVSTPFSY SPSSSSSSGF PSPNSQSSPN NSHQLPPPPP PPTASSPPLV  60
VVSPCAACKI LRRRCVEKCI LAPYFPPSEP YKFTIAHRVF GASNIIKSLQ ELPESQRADA  120
VSSMVYEASA RIRDPVYGCA GAICQLQKQV SDLQAQLAKA QAEIVTMQCQ QANLLALICM  180
EMKQSKEPMS QQQLHSIDTS CFLDDSNLAQ AWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.15e-72LBD family protein