PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747439.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 545aa MW: 62706.5 Da PI: 8.7218

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	93.5	2e-29	118	203	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+ +L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_022747439.1 118 RWPRQETITLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKNYRFFRQLEA 203 8***********************************999*************************97..66678*****85 PP
2	trihelix	61.8	1.6e-19	398	482	1	84
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 +Wt++ev Li++r+++e r+ + g++++ lWee+ km + g +r++++Ckekw+n+++++ +++ k+++e+ +++ yf+q XP_022747439.1 398 KWTEHEVSSLIQLRKSLEPRFLEtGSSRQSLWEEIETKMVSLGHRREAVECKEKWDNMQMYFDMTNAECYKKRKEDFRSINYFHQ 482 7*****************996489**************************************9999999999***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MEMADQYGLP DLRRFLARRT HFPATLPQTS EPYLPQRNMA PLAPYHEAFM LSNGMAMPSG 60 LVRFSHGHFV GASATSAIAS SASASVAAAA SRPCAAVFGV EMESSGWSLG NIDVGKSRWP 120 RQETITLLEI RSRLDSKFKE ANQKGPLWDE VSRIMSEEHG YQRSGKKCRE KFENLYKYYK 180 KTKEGKAGRQ DGKNYRFFRQ LEALYGETSN QGSVSETNLA QRTLFSQTQS NAMNQEKQES 240 MQERKLSESL SFSNASEFET SSSENNGDDL SAVAFMMKQS MENQKSGSKK GWKTKVKGFV 300 ESQMKKLIFS QDVWMKRMLK IIEDKEQERM SKEEEWRRQV AAQFDKELEF WAKEKAWVES 360 RDAALMEVLK KFTEKGLEVS SSAEAPLTKN HDEINTNKWT EHEVSSLIQL RKSLEPRFLE 420 TGSSRQSLWE EIETKMVSLG HRREAVECKE KWDNMQMYFD MTNAECYKKR KEDFRSINYF 480 HQQLDSIVGQ ENKTNYTVKD QAMDSSPSHS YDINSFQIAA VNQGDQRFWD RYGILKLGNG 540 KNHQI

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MEMADQYGLP DLRRFLARRT HFPATLPQTS EPYLPQRNMA PLAPYHEAFM LSNGMAMPSG  60
LVRFSHGHFV GASATSAIAS SASASVAAAA SRPCAAVFGV EMESSGWSLG NIDVGKSRWP  120
RQETITLLEI RSRLDSKFKE ANQKGPLWDE VSRIMSEEHG YQRSGKKCRE KFENLYKYYK  180
KTKEGKAGRQ DGKNYRFFRQ LEALYGETSN QGSVSETNLA QRTLFSQTQS NAMNQEKQES  240
MQERKLSESL SFSNASEFET SSSENNGDDL SAVAFMMKQS MENQKSGSKK GWKTKVKGFV  300
ESQMKKLIFS QDVWMKRMLK IIEDKEQERM SKEEEWRRQV AAQFDKELEF WAKEKAWVES  360
RDAALMEVLK KFTEKGLEVS SSAEAPLTKN HDEINTNKWT EHEVSSLIQL RKSLEPRFLE  420
TGSSRQSLWE EIETKMVSLG HRREAVECKE KWDNMQMYFD MTNAECYKKR KEDFRSINYF  480
HQQLDSIVGQ ENKTNYTVKD QAMDSSPSHS YDINSFQIAA VNQGDQRFWD RYGILKLGNG  540
KNHQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-102	Trihelix family protein