PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747455.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 201aa MW: 22236 Da PI: 7.8998

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.2	1.9e-45	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kf nvhk+FGasn++kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ XP_022747455.1 8 PCAACKFLRRKCQPECVFAPYFPPDQPQKFVNVHKVFGASNITKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLS 102 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_022747455.1 103 CAKSE 107 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MASSSNSPCA ACKFLRRKCQ PECVFAPYFP PDQPQKFVNV HKVFGASNIT KLLNELHPSQ 60 REDAVNSLAY EADMRLRDPV YGCVGVISLL QHQLRQLQMD LSCAKSELSK YQSLGITATT 120 HENLGFNLIG GGGGGGREHH YHHQFFPRDH HQQQMMRSFD AGSNYDASLL AMNVSAGIGQ 180 LSQYQQTRAA AGDDRSTIHP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-98	LBD family protein