PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747507.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 553aa MW: 60366.4 Da PI: 4.8982

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.7e-17	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_022747507.1 40 KGPWTSAEDAILIDYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 87 79******************************************9986 PP
2	Myb_DNA-binding	52.9	8.7e-17	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_022747507.1 93 KGAFTQEEEQLIIELHAKMGNK-WARMAAYLP-GRTDNEIKNYWNT 136 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MSHTKNQRED GMLSKDQTES PLIDDGNCGG GAAGGVVLKK GPWTSAEDAI LIDYVKKHGE 60 GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA 120 YLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVSLQALQE SHSTSAVNGG GKAPHDILQN 180 NSYEIPDVIF DSLKANQNVL PYVPELPVMS ASSMLMKGLG SSQYCSFMRP TIHCQKHLQE 240 SPAFFPGYTG AVKDECPLFE QFQDDMSDKA ARSFRWSFSI EPDPAMETSQ SFGVFPGSHA 300 LSKGNFSASE PALEAVKLEL PSLQYPETEL GNWGTLSCPP TLLESVDVFI QSPPPTSRVE 360 SDSLSPRNSG LLDALLHEAK TLSSAKNHAS DKSSNSSTPV DIAESSNFNI CETEWENRGE 420 PLSPMGHSAT SLFSECISAS GSSLDERPPA ETFTESHVKS EAADHVLTPE IQKEAPIRLD 480 GRCPDTLLAS NWLEQGSGYD KDQTIMTDAI ATLLGDDLSS DMAAGTSISS QAWGLDSCAW 540 NNIPAVCQMS ELP

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MSHTKNQRED GMLSKDQTES PLIDDGNCGG GAAGGVVLKK GPWTSAEDAI LIDYVKKHGE  60
GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA  120
YLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVSLQALQE SHSTSAVNGG GKAPHDILQN  180
NSYEIPDVIF DSLKANQNVL PYVPELPVMS ASSMLMKGLG SSQYCSFMRP TIHCQKHLQE  240
SPAFFPGYTG AVKDECPLFE QFQDDMSDKA ARSFRWSFSI EPDPAMETSQ SFGVFPGSHA  300
LSKGNFSASE PALEAVKLEL PSLQYPETEL GNWGTLSCPP TLLESVDVFI QSPPPTSRVE  360
SDSLSPRNSG LLDALLHEAK TLSSAKNHAS DKSSNSSTPV DIAESSNFNI CETEWENRGE  420
PLSPMGHSAT SLFSECISAS GSSLDERPPA ETFTESHVKS EAADHVLTPE IQKEAPIRLD  480
GRCPDTLLAS NWLEQGSGYD KDQTIMTDAI ATLLGDDLSS DMAAGTSISS QAWGLDSCAW  540
NNIPAVCQMS ELP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-136	MYB family protein