PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747508.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 490aa MW: 54169.7 Da PI: 4.8714

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	60	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_022747508.1 60 KGPWTSAEDAILIDYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 107 79******************************************9986 PP
2	Myb_DNA-binding	53.1	7.4e-17	113	156	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_022747508.1 113 KGAFTQEEEQLIIELHAKMGNK-WARMAAYLP-GRTDNEIKNYWNT 156 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MYPWELECKY EQGFVCDYKE MSHTKNQRED GMLSKDQTES PLIDDGNCGG GAAGGVVLKK 60 GPWTSAEDAI LIDYVKKHGE GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE 120 EQLIIELHAK MGNKWARMAA YLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVSLQALQE 180 SHSTSAVNGG GKAPHDILQN NSYEIPDVIF DSLKANQNVL PYVPELPVMS ASSMLMKGLG 240 SSQYCSFMRP TIHCQKHLQE SPAFFPGYTG AVKDECPLFE QFQDDMSDKA ARSFRWSFSI 300 EPDPAMETSQ SFGVFPGSHA LSKGNFSASE PALEAVKLEL PSLQYPETEL EWENRGEPLS 360 PMGHSATSLF SECISASGSS LDERPPAETF TESHVKSEAA DHVLTPEIQK EAPIRLDGRC 420 PDTLLASNWL EQGSGYDKDQ TIMTDAIATL LGDDLSSDMA AGTSISSQAW GLDSCAWNNI 480 PAVCQMSELP

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MYPWELECKY EQGFVCDYKE MSHTKNQRED GMLSKDQTES PLIDDGNCGG GAAGGVVLKK  60
GPWTSAEDAI LIDYVKKHGE GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE  120
EQLIIELHAK MGNKWARMAA YLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVSLQALQE  180
SHSTSAVNGG GKAPHDILQN NSYEIPDVIF DSLKANQNVL PYVPELPVMS ASSMLMKGLG  240
SSQYCSFMRP TIHCQKHLQE SPAFFPGYTG AVKDECPLFE QFQDDMSDKA ARSFRWSFSI  300
EPDPAMETSQ SFGVFPGSHA LSKGNFSASE PALEAVKLEL PSLQYPETEL EWENRGEPLS  360
PMGHSATSLF SECISASGSS LDERPPAETF TESHVKSEAA DHVLTPEIQK EAPIRLDGRC  420
PDTLLASNWL EQGSGYDKDQ TIMTDAIATL LGDDLSSDMA AGTSISSQAW GLDSCAWNNI  480
PAVCQMSELP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-119	MYB family protein