PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747607.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 220aa MW: 25793.2 Da PI: 9.7405

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.4e-18	58	113	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +rk+ ++t+ ql+ Le+ F+++ ++ +++ +L++ lgL+ rq+ vWFqNrRa++k XP_022747607.1 58 KRKKKRLTNGQLDSLERSFQEEIKLEPDRKMKLSRDLGLQPRQIAVWFQNRRARWK 113 789999*************************************************9 PP
2	HD-ZIP_I/II	117	1.1e-37	59	150	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl++ q+ +LE+sF+ee kLep+rK++l+r+Lglqprq+avWFqnrRAR+k+kqlE+ y+aLk+++d +++e+++L++ev +L+ l+ XP_022747607.1 59 RKKKRLTNGQLDSLERSFQEEIKLEPDRKMKLSRDLGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEFDVISREKNKLQDEVMKLKGMLR 150 69*************************************************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MDWNGTLRTF VSRPEPSLNF LYNYNYDQYP GMEMKHPGLA EAAHGLAPAL DKNSYNNKRK 60 KKRLTNGQLD SLERSFQEEI KLEPDRKMKL SRDLGLQPRQ IAVWFQNRRA RWKAKQLERL 120 YDALKQEFDV ISREKNKLQD EVMKLKGMLR EQAKRNQVST GYTEISGEET VESTSIRSYN 180 KPRVVANNHL PIAECNYLFN VDEYNPVSSP YWGLQLPSYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	89	RKKKRLTNGQLDSLERSFQEEIKLEPDRKMK
2	60	90	RKKKRLTNGQLDSLERSFQEEIKLEPDRKMK
3	108	116	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	3e-54	HD-ZIP family protein