PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022747637.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 323aa    MW: 35525.4 Da    PI: 4.9545
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022747637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.92.9e-18251284134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++ kTp+WR gp g ktLCnaCG++y++ +
  XP_022747637.1 251 CSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 284
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEYCMEARAL KSSVRGELTM QKTQQVVLDD FLYMNVVNAA GQTEDFSVDC FFDFTNGEFE  60
EGSIEEEEEE EKDSVSVSSR ERVADDDMNS NSSSFSIDSI LTKELSVPDD EIAGLEWVSH  120
FVDDSLPEVP LPCPVFEQQS ENHAKTRLEE EPEPAIVKTP SFSSPVPSKA RSKRAKSTGR  180
AWSVGSMPLS ESSSSTASSS SSSSGFSMTS TNVQNAELGN DVTEPPPKKQ KKKPAVQASG  240
LSSGNPFQRR CSHCQVQKTP QWRTGPLGAK TLCNACGVRY KSGRLFPEYR PACSPTFSVD  300
MHSNSHRKVL EMRKKKELAG TGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227234PKKQKKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.24e-52GATA family protein