PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747785.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 576aa MW: 66085 Da PI: 7.088

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.4e-29	126	211	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++r+ k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_022747785.1 126 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMnEEHGYQRNGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 211 8***********************************999*************************98..55667*****85 PP
2	trihelix	63.7	4.2e-20	421	503	2	83
trihelix 2 WtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkry.kkikegekkrtsessstcpyfd 83 W+++e+ +Li++r++me+r++ rg++++ lWee+++km gf rs+ +Ck+kw++++ + k++e++kkr +++s+ c y++ XP_022747785.1 421 WQESEISKLIQLRTSMESRFQqRGCSEEILWEEIAAKMVCLGFDRSALKCKDKWDSISAYLiTKTRESNKKR-KDNSRGCGYYQ 503 ******************9569*******************************98735666666665.8888999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MEMEDHHHHQ YGMPDPRQLM NGRPTHFQAI SQGPELFSSG HRNLPPLQPH QPNRHHHFDM 60 MQMVGRQVGH EFMPHGLHHE FPSDSTDNNA TPTAAVATVT SASTPSASCG FDGEATAFGG 120 DGGTGRWPRQ ETLTLLEIRS RLDPKFKEAN QKGPLWDEVS RIMNEEHGYQ RNGKKCREKF 180 ENLYKYYKKT KEGKAGRQDG KHYRFFRQLE ALYGETSNSV SGQETHLVGN NFRFHGNPNS 240 NAQSNQEVYH AQKLCDSLSL SNSSEFDTSS DDNDLSTAAA VENDSSEKRK KKRGSSRSWK 300 AKIKEFIDSQ MRKLVERQEA WLEKLTKTLE QKEQERILRE EEWRKEEAAR IDREHKFWAK 360 ERAWIEARDA ALMESLQNLK GKKFKAASSE ELMATEMQNH SENQNENGSE TINNNVKADG 420 WQESEISKLI QLRTSMESRF QQRGCSEEIL WEEIAAKMVC LGFDRSALKC KDKWDSISAY 480 LITKTRESNK KRKDNSRGCG YYQNNDQSLY SQRRAYCEIN DQQGPETVRL QTNDSSSPSN 540 SNAGNAVNDS CFRFLMADGE NLWENYGVKL SKGENQ

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MEMEDHHHHQ YGMPDPRQLM NGRPTHFQAI SQGPELFSSG HRNLPPLQPH QPNRHHHFDM  60
MQMVGRQVGH EFMPHGLHHE FPSDSTDNNA TPTAAVATVT SASTPSASCG FDGEATAFGG  120
DGGTGRWPRQ ETLTLLEIRS RLDPKFKEAN QKGPLWDEVS RIMNEEHGYQ RNGKKCREKF  180
ENLYKYYKKT KEGKAGRQDG KHYRFFRQLE ALYGETSNSV SGQETHLVGN NFRFHGNPNS  240
NAQSNQEVYH AQKLCDSLSL SNSSEFDTSS DDNDLSTAAA VENDSSEKRK KKRGSSRSWK  300
AKIKEFIDSQ MRKLVERQEA WLEKLTKTLE QKEQERILRE EEWRKEEAAR IDREHKFWAK  360
ERAWIEARDA ALMESLQNLK GKKFKAASSE ELMATEMQNH SENQNENGSE TINNNVKADG  420
WQESEISKLI QLRTSMESRF QQRGCSEEIL WEEIAAKMVC LGFDRSALKC KDKWDSISAY  480
LITKTRESNK KRKDNSRGCG YYQNNDQSLY SQRRAYCEIN DQQGPETVRL QTNDSSSPSN  540
SNAGNAVNDS CFRFLMADGE NLWENYGVKL SKGENQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-141	Trihelix family protein