PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748226.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 206aa MW: 23281.1 Da PI: 5.2184

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	75.7	3.5e-24	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien +qv fskRrng+lKKA+ELS+LCdaev viifss +k+y +ss XP_022748226.1 9 KKIENLNSKQVMFSKRRNGLLKKAKELSILCDAEVGVIIFSSIDKVYQWSS 59 68***********************************************96 PP
2	K-box	44.5	6.5e-16	66	125	41	100
K-box 41 edLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++L+ Ls+keLqqLe+qL++++ +++++K+++lleq+++++ +e+++ e+++Lr+++ee XP_022748226.1 66 KGLDGLSFKELQQLEHQLNEGILSVKEQKEQILLEQLKRSRLQEQNTILETETLRNQVEE 125 789******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MGKGKIEIKK IENLNSKQVM FSKRRNGLLK KAKELSILCD AEVGVIIFSS IDKVYQWSST 60 TRLNAKGLDG LSFKELQQLE HQLNEGILSV KEQKEQILLE QLKRSRLQEQ NTILETETLR 120 NQVEELQQRT SSNLLEFNPL RIRFSTTSSK ADDYDCASEG EDDDNDENDH SDTSLHLGLA 180 SDVGRKRKVA KVEPITNDSG SQVASE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57390.1	1e-38	MIKC_MADS family protein