PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748379.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 698aa MW: 75540 Da PI: 6.5052

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.1	2.1e-15	467	513	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+ + L+ l+P++ K++Ka++L +A+eY+k Lq XP_022748379.1 467 VHNLSERRRRDRINENMRALQALIPNC-----NKVDKASMLDEAIEYLKTLQ 513 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MVLNYMQFSN LVVLRLFVLP FPYVFECRPK NDFVELVWEN GQILMQAQSS RARKIPACNS 60 LPSHCLPLHT PKSRHKDTGN VGTNTKMVKF GAMDSELSEI PMSVASGEMG LDQDDEVVPW 120 LNYPVNQSLR DEYSDFLPEL SGVSANENPN LSNFASFDRR NQSIRDSSTI SLDDGAGFEQ 180 GNLSKVPRLA DGEAMPRTGT SQLCMLPSHP CQTSSPYFRL QILENISTCL SHTTTHRSIC 240 RDSVGVQIPD GGLSGIKMQK QDPVPPCNNT VLMKISHFLH PATLVKASLK NIGSMASTER 300 IGSKEKGSAA SISNPADITL IHSNIELQKE KFSHCQPMIV PMKTDIKESE PRSLDESVAA 360 EPTDAICEEN VLKNDKNPIQ VIGESAFIGL PDSDKAVEPV LVASSVCSGS SVERASDGPV 420 HNLKRKNRDN EESECPSEDA EEESIGMKKA VPARGGIGSK RSRAAEVHNL SERRRRDRIN 480 ENMRALQALI PNCNKVDKAS MLDEAIEYLK TLQLHVQIMS MGDGLYLSPM MLTTGMQHMH 540 AAHVVHISPI GVGTGMDMGF GIPLPHMNAG SSTCPMVQVP PIPGAPFSGP GPHISGPTAL 600 HGMAGSNLHL FGLPGQGFSM SMPRAPLIPI SGRHLMKSAM GLSACGLVGP MDNMDSATAS 660 SSRDPVQNIN SQVAQNTMAN SSMNKTPTQC PTTTQSLE

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MVLNYMQFSN LVVLRLFVLP FPYVFECRPK NDFVELVWEN GQILMQAQSS RARKIPACNS  60
LPSHCLPLHT PKSRHKDTGN VGTNTKMVKF GAMDSELSEI PMSVASGEMG LDQDDEVVPW  120
LNYPVNQSLR DEYSDFLPEL SGVSANENPN LSNFASFDRR NQSIRDSSTI SLDDGAGFEQ  180
GNLSKVPRLA DGEAMPRTGT SQLCMLPSHP CQTSSPYFRL QILENISTCL SHTTTHRSIC  240
RDSVGVQIPD GGLSGIKMQK QDPVPPCNNT VLMKISHFLH PATLVKASLK NIGSMASTER  300
IGSKEKGSAA SISNPADITL IHSNIELQKE KFSHCQPMIV PMKTDIKESE PRSLDESVAA  360
EPTDAICEEN VLKNDKNPIQ VIGESAFIGL PDSDKAVEPV LVASSVCSGS SVERASDGPV  420
HNLKRKNRDN EESECPSEDA EEESIGMKKA VPARGGIGSK RSRAAEVHNL SERRRRDRIN  480
ENMRALQALI PNCNKVDKAS MLDEAIEYLK TLQLHVQIMS MGDGLYLSPM MLTTGMQHMH  540
AAHVVHISPI GVGTGMDMGF GIPLPHMNAG SSTCPMVQVP PIPGAPFSGP GPHISGPTAL  600
HGMAGSNLHL FGLPGQGFSM SMPRAPLIPI SGRHLMKSAM GLSACGLVGP MDNMDSATAS  660
SSRDPVQNIN SQVAQNTMAN SSMNKTPTQC PTTTQSLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	472	477	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-58	bHLH family protein