PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748380.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 654aa MW: 70235.7 Da PI: 6.579

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.2	2e-15	423	469	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+ + L+ l+P++ K++Ka++L +A+eY+k Lq XP_022748380.1 423 VHNLSERRRRDRINENMRALQALIPNC-----NKVDKASMLDEAIEYLKTLQ 469 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MQAQSSRARK IPACNSLPSH CLPLHTPKSR HKDTGNVGTN TKMVKFGAMD SELSEIPMSV 60 ASGEMGLDQD DEVVPWLNYP VNQSLRDEYS DFLPELSGVS ANENPNLSNF ASFDRRNQSI 120 RDSSTISLDD GAGFEQGNLS KVPRLADGEA MPRTGTSQLC MLPSHPCQTS SPYFRLQILE 180 NISTCLSHTT THRSICRDSV GVQIPDGGLS GIKMQKQDPV PPCNNTVLMK ISHFLHPATL 240 VKASLKNIGS MASTERIGSK EKGSAASISN PADITLIHSN IELQKEKFSH CQPMIVPMKT 300 DIKESEPRSL DESVAAEPTD AICEENVLKN DKNPIQVIGE SAFIGLPDSD KAVEPVLVAS 360 SVCSGSSVER ASDGPVHNLK RKNRDNEESE CPSEDAEEES IGMKKAVPAR GGIGSKRSRA 420 AEVHNLSERR RRDRINENMR ALQALIPNCN KVDKASMLDE AIEYLKTLQL HVQIMSMGDG 480 LYLSPMMLTT GMQHMHAAHV VHISPIGVGT GMDMGFGIPL PHMNAGSSTC PMVQVPPIPG 540 APFSGPGPHI SGPTALHGMA GSNLHLFGLP GQGFSMSMPR APLIPISGRH LMKSAMGLSA 600 CGLVGPMDNM DSATASSSRD PVQNINSQVA QNTMANSSMN KTPTQCPTTT QSLE

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MQAQSSRARK IPACNSLPSH CLPLHTPKSR HKDTGNVGTN TKMVKFGAMD SELSEIPMSV  60
ASGEMGLDQD DEVVPWLNYP VNQSLRDEYS DFLPELSGVS ANENPNLSNF ASFDRRNQSI  120
RDSSTISLDD GAGFEQGNLS KVPRLADGEA MPRTGTSQLC MLPSHPCQTS SPYFRLQILE  180
NISTCLSHTT THRSICRDSV GVQIPDGGLS GIKMQKQDPV PPCNNTVLMK ISHFLHPATL  240
VKASLKNIGS MASTERIGSK EKGSAASISN PADITLIHSN IELQKEKFSH CQPMIVPMKT  300
DIKESEPRSL DESVAAEPTD AICEENVLKN DKNPIQVIGE SAFIGLPDSD KAVEPVLVAS  360
SVCSGSSVER ASDGPVHNLK RKNRDNEESE CPSEDAEEES IGMKKAVPAR GGIGSKRSRA  420
AEVHNLSERR RRDRINENMR ALQALIPNCN KVDKASMLDE AIEYLKTLQL HVQIMSMGDG  480
LYLSPMMLTT GMQHMHAAHV VHISPIGVGT GMDMGFGIPL PHMNAGSSTC PMVQVPPIPG  540
APFSGPGPHI SGPTALHGMA GSNLHLFGLP GQGFSMSMPR APLIPISGRH LMKSAMGLSA  600
CGLVGPMDNM DSATASSSRD PVQNINSQVA QNTMANSSMN KTPTQCPTTT QSLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	428	433	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-52	bHLH family protein