PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748482.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 287aa    MW: 31451.8 Da    PI: 9.8441
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.8e-144286147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_022748482.1 42 RESWTEEEHDKFIEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 86
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MNSTSSSPNP PPPPPPQSSM STTSADGSGK KVRKPYTITK SRESWTEEEH DKFIEALQLF  60
DRDWKKIEDF VGSKTVIQIR SHAQKYFLKV QKNGTIAHVP PPRPKRKASH PYPQKASKNV  120
LVPLQASMAY PSSMNTIAPG FAPWDEASML VNTASSKIMP PQDDFTRLGG AEGMADIGSK  180
GVARINNSGV SGIGSSSRTI PSSDMPNQGK QTAMLHGIPD FSEVYGFIGS VFDPDTQGHV  240
QKLKEMDPIN FETVLLLMRN LTVNLCSPDF EPIRKPAKHL KDGHVLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-127MYB_related family protein