PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748799.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 283aa    MW: 31722.7 Da    PI: 7.0087
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEd++l+ +++++G  +W++ ++  g+ R++k+c++rw +yl
   XP_022748799.1 14 KGPWAPEEDQILISYIQKYGHANWRKLPKQAGLVRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.16.4e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE+e ++++++ lG++ W++Ia+ ++ gRt++++k+ w+++l
   XP_022748799.1  67 RGNFTLEEEETIIKLHEVLGNR-WSAIAAILP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MARAPSCDKM GLRKGPWAPE EDQILISYIQ KYGHANWRKL PKQAGLVRCG KSCRLRWINY  60
LRPDIKRGNF TLEEEETIIK LHEVLGNRWS AIAAILPGRT DNEIKNVWHT HLKKRLKQYQ  120
TKPDTKRNPK SKSEMKCESS NCISRSQSES GDSSSITGNI LSSTEVSGKT PMSPQPSSSE  180
VSSITDATTA ITGRKANNMD IKAVNMGCWE SFWSDALSAD NSSAISLNFE GVNDGFQSHQ  240
VPSSSVDVME PDYEYGQNLD DAMEFWYDLF IKAGGEEELI KAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKRLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.19e-81MYB family protein