PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748811.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 413aa MW: 45863.5 Da PI: 4.9827

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l+++++ G g+W++ ++ g+ R++k+c++rw +yl XP_022748811.1 14 RGRWTAEEDEILANYIHANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	51.2	2.9e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E+e +v+++ lG++ W++Ia+ ++ gRt++++k++w+++l XP_022748811.1 67 RGNITAQEEETIVKLHSALGNR-WSLIAAQLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MGRSTCCEKV GLKRGRWTAE EDEILANYIH ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAQEEETIVK LHSALGNRWS LIAAQLPGRT DNEIKNYWNS HLSRKIYSFT 120 KIIKDTKPSN IGAVTTAGEG KRRGGRTSRS AMKRHKLALM SLGIPKTVTP NEVFDPAAQE 180 NSPGGQVRDS KDMTNMQPED NDDPDSAVLE GRRNLGMHGS CMHSSARPAG NYDERQSTGI 240 ALSSGKESSS VAVEMYGCSE RETEEVLGPY EWLDNEIKRL RSILQSEGVH PSGNHAGSIT 300 TNGENEVRVI ITEQDRDVNG IQKGAKNDDQ EIESYGIWSS SNAEMTDGEW QIRNSSSPGN 360 SVFDDHEWVD WENFGGGFQY YDDDQFPLWD DSGKVLCWLL DGDNADEAGD APN

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MGRSTCCEKV GLKRGRWTAE EDEILANYIH ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TAQEEETIVK LHSALGNRWS LIAAQLPGRT DNEIKNYWNS HLSRKIYSFT  120
KIIKDTKPSN IGAVTTAGEG KRRGGRTSRS AMKRHKLALM SLGIPKTVTP NEVFDPAAQE  180
NSPGGQVRDS KDMTNMQPED NDDPDSAVLE GRRNLGMHGS CMHSSARPAG NYDERQSTGI  240
ALSSGKESSS VAVEMYGCSE RETEEVLGPY EWLDNEIKRL RSILQSEGVH PSGNHAGSIT  300
TNGENEVRVI ITEQDRDVNG IQKGAKNDDQ EIESYGIWSS SNAEMTDGEW QIRNSSSPGN  360
SVFDDHEWVD WENFGGGFQY YDDDQFPLWD DSGKVLCWLL DGDNADEAGD APN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-78	MYB family protein