PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748857.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family B3
Protein Properties Length: 114aa    MW: 12652.7 Da    PI: 9.4315
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.71.5e-11499198
                    EEEE-..-HHHHTT-EE--HHH.HTT---...--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkke.esktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                    f kvlt++dv ++  + +  + a     ++    + l++ed  g  W++ +  + ++g     vl +GW +Fv+++gL+ gD+v ++  ++++++++
  XP_022748857.1  4 FSKVLTTPDVERRLSFPIGSEAA--LPRSQGcHVMVLQVEDDAGILWNFGC--KMQPGVipkLVLVSGWIQFVRSKGLRNGDIVNLS--KEEGAHYK 94
                    78999999999985454444444..4222230345689999**********..777777778***********************99..66888888 PP

                    EEEE- CS
              B3 94 vkvfr 98
                    ++v r
  XP_022748857.1 95 IQVKR 99
                    88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MQNFSKVLTT PDVERRLSFP IGSEAALPRS QGCHVMVLQV EDDAGILWNF GCKMQPGVIP  60
KLVLVSGWIQ FVRSKGLRNG DIVNLSKEEG AHYKIQVKRS DTLSSGQKHV CLCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60140.14e-08B3 family protein