PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748904.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family CO-like
Protein Properties Length: 468aa    MW: 51604.1 Da    PI: 7.6958
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.64e-061351537
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                     C  ++e+ + l+C+ ++  lC  C ++ H+       H
  XP_022748904.1 13 PCGFCNEQIAVLYCRADSAKLCLFCDQHVHSAnllsrkH 51
                    6***************************99545555555 PP
2zf-B_box23.89.6e-085498341
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                     ++C++++ ++++  C +++  lC++C    H g      H+++p
  XP_022748904.1 54 SQICDNCGTEPVSVRCATDSLVLCQECDWDAHGGcsvsaaHDRTP 98
                    579*************************99996688999998877 PP
3CCT63.65.8e-22420463144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk+a
  XP_022748904.1 420 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAA 463
                     7789*************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
MVSPKPEGKG TVPCGFCNEQ IAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC  60
GTEPVSVRCA TDSLVLCQEC DWDAHGGCSV SAAHDRTPVE GFSGCPSALE LASAWGYDLE  120
EKKLSDQSWN RDYQDLMMPA VESWAYKTSV QEMMVPYDCF SYGEMLKKQN LGSGKCKQVI  180
YKQLVDLMKR DFMGGVVADG GGGVGENLVS NVESNGSFLA RQDVIQPQLQ QETQTPFTSL  240
LMMQTQESER IVDGVNVLWN GNLNVQTPQN FLQIWDFKLG RLRGEEECNK SQSEEVGYGG  300
SDAGFKIKNF SELMKDTSLT NVKLLGDICH INYPPTSQDD MASVNNNNPS NPGANQGPAT  360
SESNNIPIAR PSSGAAFGKT KCSSSSNDVH FMQQPFLVKG AQARPAAPNK ADLELLAQNR  420
GNAMQRYKEK KKTRRYDKHI RYESRKARAD TRKRVKGRFV KAANASAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28050.11e-110CO-like family protein