PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748920.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 430aa MW: 47494.8 Da PI: 7.0432

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84	1.6e-26	154	208	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+ave L G +kA+P++ile+m++++Lt+++++SHLQkYR++ XP_022748920.1 154 KVKVDWTPELHRRFVQAVELL-GLDKAVPSRILEHMGIDCLTRHNIASHLQKYRSH 208 5689***************.******************************86 PP
2	Myb_DNA-binding	39.5	1.3e-12	157	206	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av++lG + +++I ++mg +t+ ++ s++qky+ XP_022748920.1 157 VDWTPELHRRFVQAVELLGLDkaVPSRILEHMGiDCLTRHNIASHLQKYR 206 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MLAVSPLGNT SKDENKGEKQ NSTISAEEFP DFADGNLLES TDFDDLFVGI DVEGDVLPDL 60 EIDPEILTEL PASGCEELEI NTSVEKTVED DNQRKKEEDK VSNSGSGLVS SSSKGKEIVS 120 KREEPKAVKT PSKDADKGRK PSAQPKDNNQ GKRKVKVDWT PELHRRFVQA VELLGLDKAV 180 PSRILEHMGI DCLTRHNIAS HLQKYRSHRK HLLAREAAAE GASWTHRRQV YGAAIPVGGG 240 KRDMNPWLAP TMGFPPMSPS PMHHHHHLFR PLHVWGHPTV DQSLMHLWPK HLARTQFPPP 300 QPRPMWGPSS ADPSYWHHHH QRVPNGLTPG TPCFPQAMAP TRFAAPLIPG FPPYHAMFKA 360 DPDIGVEAEQ SGPHPPIDFH LSKESIDAAI GDVLSKPWLP LPLGLKPPST GSVLRELQRQ 420 GVPKVPPSCA

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MLAVSPLGNT SKDENKGEKQ NSTISAEEFP DFADGNLLES TDFDDLFVGI DVEGDVLPDL  60
EIDPEILTEL PASGCEELEI NTSVEKTVED DNQRKKEEDK VSNSGSGLVS SSSKGKEIVS  120
KREEPKAVKT PSKDADKGRK PSAQPKDNNQ GKRKVKVDWT PELHRRFVQA VELLGLDKAV  180
PSRILEHMGI DCLTRHNIAS HLQKYRSHRK HLLAREAAAE GASWTHRRQV YGAAIPVGGG  240
KRDMNPWLAP TMGFPPMSPS PMHHHHHLFR PLHVWGHPTV DQSLMHLWPK HLARTQFPPP  300
QPRPMWGPSS ADPSYWHHHH QRVPNGLTPG TPCFPQAMAP TRFAAPLIPG FPPYHAMFKA  360
DPDIGVEAEQ SGPHPPIDFH LSKESIDAAI GDVLSKPWLP LPLGLKPPST GSVLRELQRQ  420
GVPKVPPSCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	1e-90	G2-like family protein