PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748978.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 240aa MW: 27901.9 Da PI: 9.8505

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24	7e-08	87	131	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er RR++ ++++ L ++lP++ +K +K +i++ A++ +++L XP_022748978.1 87 HMMNERMRREKQKQSYLALHSMLPPR-----TKHDKNSIVQTATKRVQEL 131 889**********************9.....8999999999999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MDQWIKQLLQ GEIFWHEATP APPVSRSAFA PYQNTPLRIE LGLESASGSN NGVNSGNTNK 60 RMIEFLRKSW HAMTETKDTE KERCFRHMMN ERMRREKQKQ SYLALHSMLP PRTKHDKNSI 120 VQTATKRVQE LEWLKKDLQR RNYELQANLA AMNEEKDSEG IKIIVRIDNP TSGIDSMLEA 180 LKCLKKLNSK PRMIQSTFTN QEFLAVIDIE TEMGAAQIEK VVNNTVQEAE RKVQERWTRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	2e-43	bHLH family protein