PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749065.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 316aa    MW: 35414.3 Da    PI: 6.5183
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.9e-182471148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT +Ed +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_022749065.1 24 RGPWTVQEDFKLINYIATHGEGRWNSLARCAGLNRTGKSCRLRWLNYL 71
                     89********************************************97 PP
2Myb_DNA-binding51.32.7e-1677120146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022749065.1  77 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 120
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDVKARGFSG NVQSEEDQMD LIRRGPWTVQ EDFKLINYIA THGEGRWNSL ARCAGLNRTG  60
KSCRLRWLNY LRPDVRRGNI TLEEQLLILE LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT  120
RVQKHAKQLK CDVNSKQFKD TMRYIWMPRL VERIQAAAAA TATSTTAVTV ASTTTTSASL  180
TTTANVGTGQ MILPLGVIGN GFGGAQVTPS YTPENSSTAA SSDSFGSQVS PVSDLTDYYS  240
SIQVNNNDPN PDYFQASQVR CSELISPSGN YYNQGIDFQS MDQQNDPWLD GGNDASDNFL  300
NAEDILFLQQ QFNFNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.18e-90MYB family protein