PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749077.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 268aa MW: 30596 Da PI: 6.0558

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ +++ g+ R++k+c++rw +yl XP_022749077.1 14 KGTWTPEEDRKLKAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWMNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	55	1.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE+e ++++++ lG++ W+ Ia++++ gRt++++k++w++ XP_022749077.1 67 RGNYTEEEEETIIRLHESLGNR-WSIIAAELP-GRTDNEVKNHWHTT 111 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MVRTPCCDKS GLRKGTWTPE EDRKLKAYVT RYGCWNWRQL PKYAGLARCG KSCRLRWMNY 60 LRPNIKRGNY TEEEEETIIR LHESLGNRWS IIAAELPGRT DNEVKNHWHT TLKKRFKHKP 120 PVTKDGKENS QDPVVKRGTS AEEKETKLNN HDPLINPTSP PLILESSMSS PQPASSDQNS 180 SITADNTVVS SKDSVSDNNN YNNNKANLFE AYEANSGNFW TEPFFSDSCY MSSDMQMDPA 240 GCEAEFPFLD GEILCPFGFD DQLEGFNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-53	MYB family protein