PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749084.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 445aa    MW: 49825.7 Da    PI: 5.7509
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS297.82.7e-91444382373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lLl+cA a++ +d +laq++++ l++ as+ gdp+qRl++ f++AL +r +r ++++++    s+ +++ ++ +   l  ++++ P+++f++ 
  XP_022749084.1  44 EKLLLHCASALERNDVTLAQQIMWVLNNVASSVGDPNQRLTSWFLRALISRASRVCPTTMDFNGGSTFHRRLMTVT--ELAGYVDLIPWHRFGFC 136
                     689*********************************************************9998888875443333..33359************ PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl....... 181
                     + N+aI +av+g  +vHi+Df+i++++QWp+L++aLa+R+egppslRiT+ +   ++    + ++e +g+rLa+fA+  +vpfef+v+       
  XP_022749084.1 137 ASNSAIFNAVQGYPKVHILDFSITHCMQWPTLIDALAKRAEGPPSLRITVPSCRPPVpplLNVSTEDVGHRLANFAKFRDVPFEFHVIedpclps 231
                     *************************************************97776566779999******************************** PP

            GRAS 182 .............vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerfle 259
                                   ++ l+ l++++L+++++Eal++n++  + +l de+   +      rd++L+++k+l+P+++vvv++++d++++s+  r++ 
  XP_022749084.1 232 sgeilskeysgfqFESLLSHLTYSKLDLREDEALVINCQNWIRYLSDERKGNTAhdssLRDAFLHIIKGLNPRIIVVVDEDSDLSASSLTSRITT 326
                     ***99998888877778889999999*****************9998765443334459************************************ PP

            GRAS 260 aleyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                     +++y +  fd+le+ lp++s++r+ +E   +g +i+n+++ eg++r+e+ e+ +k ++r+++aGF  vp+ e++ +++k+ll +++  g+ ++ e
  XP_022749084.1 327 CFNYLWIPFDALETFLPKDSSQRVEYESD-IGHKIENIISFEGFQRIEKLESGAKLSQRMKNAGFFGVPFCEETITEVKSLLDEHA-SGWGMKRE 419
                     *****************************.********************************************************.88999999 PP

            GRAS 355 sgslvlgWkdrpLvsvSaW 373
                     ++ lvl+Wk+++ v+++aW
  XP_022749084.1 420 EDMLVLTWKGHNSVFATAW 438
                     9****************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MKSELRGNNA SISLQNPSLF DTQQSSITGA LRGCLGSLDG ACIEKLLLHC ASALERNDVT  60
LAQQIMWVLN NVASSVGDPN QRLTSWFLRA LISRASRVCP TTMDFNGGST FHRRLMTVTE  120
LAGYVDLIPW HRFGFCASNS AIFNAVQGYP KVHILDFSIT HCMQWPTLID ALAKRAEGPP  180
SLRITVPSCR PPVPPLLNVS TEDVGHRLAN FAKFRDVPFE FHVIEDPCLP SSGEILSKEY  240
SGFQFESLLS HLTYSKLDLR EDEALVINCQ NWIRYLSDER KGNTAHDSSL RDAFLHIIKG  300
LNPRIIVVVD EDSDLSASSL TSRITTCFNY LWIPFDALET FLPKDSSQRV EYESDIGHKI  360
ENIISFEGFQ RIEKLESGAK LSQRMKNAGF FGVPFCEETI TEVKSLLDEH ASGWGMKREE  420
DMLVLTWKGH NSVFATAWAL TGLED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-124GRAS family protein