PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749236.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 239aa    MW: 27309 Da    PI: 9.3671
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.46.8e-221762449
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +n+sn qvtfskRr g++KKA+EL++LC+ae+ +i+fs+  k++ +
  XP_022749236.1 17 KNSSNLQVTFSKRRSGLFKKASELCTLCGAEIGIIVFSPGKKVFSF 62
                    8**************************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEKKSLGRQK VEMVKMKNSS NLQVTFSKRR SGLFKKASEL CTLCGAEIGI IVFSPGKKVF  60
SFGHPEIGNI IDRYLNHSTP ETSGTSQFIE AHRNANVREL NMHLTEMVRQ LEVEKRRGEE  120
LDQMRRTSQS QHWWEAPIEE LSLPHLQQLK SAMEELKKNM AKQAEKHLIQ STNSQQFFMG  180
SSSAGVFPNY ETKNISFDVN MMPQGYNAPN MIPPGFNFNP EGYNPNPQGY NPEFGRGFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-68M-type_MADS family protein