PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749417.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 362aa MW: 40977.2 Da PI: 5.1254

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+ ++++G +W++ ++ g+ R++k+c++rw +yl XP_022749417.1 16 RGPWSPAEDLRLITFIQKHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	52.7	9.9e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e ++++++ lG++ W++Ia+++ gRt++++k+ w+++l XP_022749417.1 69 RGNFTKEEEETIIRLHETLGNK-WSKIASHLE-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MRKGRAPCCD KDKVKRGPWS PAEDLRLITF IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTKEEEETI IRLHETLGNK WSKIASHLEG RTDNEIKNVW NTHLKKRLAS 120 KKGNIPQKDE SKESSMTSSS SCSSITFVSS SSGKRNLEVE LEQQWDERSM TKNPTEAFAI 180 AVSDVAQGFK TELSNHSSSP SEEPKELSSC SISSNNTNSS QADVSNQDDQ AGSLFNFKGF 240 YDAKNTSEEV NKPDQISDTV FDIPLESDLD FWNMLDSLGS FQSDGIQSHE VEGTQSSNFG 300 EEYSKEAENN NWLLYLENET KNENQKKLSK DAAEPLVPEM YDMVLEPEDE MGMGHYHIWS 360 SS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MRKGRAPCCD KDKVKRGPWS PAEDLRLITF IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTKEEEETI IRLHETLGNK WSKIASHLEG RTDNEIKNVW NTHLKKRLAS  120
KKGNIPQKDE SKESSMTSSS SCSSITFVSS SSGKRNLEVE LEQQWDERSM TKNPTEAFAI  180
AVSDVAQGFK TELSNHSSSP SEEPKELSSC SISSNNTNSS QADVSNQDDQ AGSLFNFKGF  240
YDAKNTSEEV NKPDQISDTV FDIPLESDLD FWNMLDSLGS FQSDGIQSHE VEGTQSSNFG  300
EEYSKEAENN NWLLYLENET KNENQKKLSK DAAEPLVPEM YDMVLEPEDE MGMGHYHIWS  360
SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	5e-73	MYB family protein