PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749422.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 686aa MW: 76574.1 Da PI: 4.4865

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.6	3.9e-10	536	579	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r rW++++ el++ a++q+G++ +++I + ++ gR++ q+k+++ + XP_022749422.1 536 RARWSKQDTELFYGAIRQFGPD-FSLIQQLFP-GRSRHQIKLKFKN 579 569***************88.*****.********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MEDSNFFLDE PVVTQARAGA KFQPKAKRKA KDETSGSIAS KLPDVMKEEA VKLASAGLDA 60 VQVVQPDDVF DGTRSSQVIN PSQVAVSDSL LAEVLVSNSC DDTNSSFGRS VGENADLFFG 120 LECLDQFLTQ SSNNDGGIQI DFEETGTQNI YSFQEAGAFP DVETQDILSD TTIGSGRRAG 180 KFKPKPRLQT SVVTTQPAVV ESVMHPPNSQ FVETMCGESS IPDIPMDDFP DCSPMDLGAF 240 IPPDPSTTKY PMNEELADLT EASNPGVDLS GDIPTMPQKL SSNIRPKKAS HVSNPSPKSK 300 QSFTGDEGNE NGKATKQLRK SVTSPQIVDD PKDDTCNDDG IASELPHSSA IDEDKDDEDG 360 EDDDDDDEYN VESAYPKRRT TRTSKKNVNE NEKLLRKRKI ANEAQKRKKA NEPSDQPAKE 420 QRKKFSHTTR RKRRFVDESL LHTPEDEIDF AKVALKDIIL FADYKERLAK KEAKTSKIPL 480 PNQSTRQTFD EENAHDEESF IASEQDQGFT DDQVSGRAQS SSFCLNYQSY MDKEPRARWS 540 KQDTELFYGA IRQFGPDFSL IQQLFPGRSR HQIKLKFKNE ERRCPFKLSE ALASRDKDHS 600 YFEKVIKQLQ QVAGAEQESH GDVSVDLTRE EAVLTPRTNE EVAKPEQDED IAVRDQEADV 660 TEDHSTLKPD ETDDDHEILS SYRSSF

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MEDSNFFLDE PVVTQARAGA KFQPKAKRKA KDETSGSIAS KLPDVMKEEA VKLASAGLDA  60
VQVVQPDDVF DGTRSSQVIN PSQVAVSDSL LAEVLVSNSC DDTNSSFGRS VGENADLFFG  120
LECLDQFLTQ SSNNDGGIQI DFEETGTQNI YSFQEAGAFP DVETQDILSD TTIGSGRRAG  180
KFKPKPRLQT SVVTTQPAVV ESVMHPPNSQ FVETMCGESS IPDIPMDDFP DCSPMDLGAF  240
IPPDPSTTKY PMNEELADLT EASNPGVDLS GDIPTMPQKL SSNIRPKKAS HVSNPSPKSK  300
QSFTGDEGNE NGKATKQLRK SVTSPQIVDD PKDDTCNDDG IASELPHSSA IDEDKDDEDG  360
EDDDDDDEYN VESAYPKRRT TRTSKKNVNE NEKLLRKRKI ANEAQKRKKA NEPSDQPAKE  420
QRKKFSHTTR RKRRFVDESL LHTPEDEIDF AKVALKDIIL FADYKERLAK KEAKTSKIPL  480
PNQSTRQTFD EENAHDEESF IASEQDQGFT DDQVSGRAQS SSFCLNYQSY MDKEPRARWS  540
KQDTELFYGA IRQFGPDFSL IQQLFPGRSR HQIKLKFKNE ERRCPFKLSE ALASRDKDHS  600
YFEKVIKQLQ QVAGAEQESH GDVSVDLTRE EAVLTPRTNE EVAKPEQDED IAVRDQEADV  660
TEDHSTLKPD ETDDDHEILS SYRSSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	377	399	KRRTTRTSKKNVNENEKLLRKRK
2	393	399	KLLRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	3e-45	MYB_related family protein