PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749509.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 320aa MW: 36624.2 Da PI: 4.9869

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.9	2.3e-10	248	297	3	52
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 R +++k q+e+Le+++++++ p+ +++ + + ++L+ ++V WF +R XP_022749509.1 248 ARKRLKKVQVETLEKVYRRSKRPTNAMISSIVQVTNLPRKRVVKWFEDKR 297 58999******************************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MASALSVNSS ISPRLLQSSS CTERLFIAHP TPFNLLRPRQ SSYLSTLAFS RRRNSTPATI 60 SAKKKKVKKG LVEEDDFDGD PFEALFSQLE EDLKNNNSDT EDDDDDDEIK EEDVDRLATE 120 LAEALGDFDF EADDAEEEDE EPVQLKNWQL RKLAAVLKVG RRKSNIKTLA AELCLDRAVV 180 LELLREPTPE LLMMSATLPD EPVKREPVLE TKHIETNALE TTVDAVKYEP EESKVKEPVH 240 VMQHRWSARK RLKKVQVETL EKVYRRSKRP TNAMISSIVQ VTNLPRKRVV KWFEDKRNED 300 GIPEHHQPYQ RSVSETVSSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	66	RRRNSTPATISAKKKK
2	248	256	ARKRLKKVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	1e-60	HB-other family protein