PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749658.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 254aa MW: 29547.2 Da PI: 6.8023

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W +eEd++l+++v+ +G g+W t++++ g+ R +k+c++rw +yl XP_022749658.1 13 RGLWKPEEDLILKNYVETHGEGNWGTVSKRSGLMRGGKSCRLRWKNYL 60 788*******************************************97 PP
2	Myb_DNA-binding	52.9	8.4e-17	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022749658.1 66 RGGMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 6779****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEKIKETKAQ SKRGLWKPEE DLILKNYVET HGEGNWGTVS KRSGLMRGGK SCRLRWKNYL 60 RPNIKRGGMS QEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKKNLLGKR 120 KTIDSNKQHI DNEDNIEKQD RRKPSQPHKS QSIFSTSPER TTDEGLMDLD EKKQQVKEES 180 SFTDGTWMEG AVQCFNYDYD YDIDMIGTPL MMMNPDYSNF VFDEGPFTSY MDSFVLFEAF 240 GTDSDHVGIQ SFLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-70	MYB family protein