PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749869.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 593aa MW: 65534.4 Da PI: 7.1247

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.7	8.9e-30	68	152	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++ k+plWeev++k++e g++rs+k+Ckek+en+ k++k++k+g+ + + +t+++fdqlea XP_022749869.1 68 RWPRQETLALLKIRSDMDVTFRDASVKGPLWEEVARKLAELGYHRSAKKCKEKFENVYKYHKRTKDGRTAK--SDGKTYRFFDQLEA 152 8******************************************************************96..45567*****85 PP
2	trihelix	104.2	9.5e-33	420	505	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k e+ aLi++r++++++++++ k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a XP_022749869.1 420 RWPKVEIEALIKLRTSLDSKYQDSGPKGPLWEEISSAMKKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 505 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MLGGGDTTGG DVAAAAAAAA VVTSSGARDG SSEAAAATML GSNGNNNNSG EDDRGRVDEG 60 DSSLGGNRWP RQETLALLKI RSDMDVTFRD ASVKGPLWEE VARKLAELGY HRSAKKCKEK 120 FENVYKYHKR TKDGRTAKSD GKTYRFFDQL EALENNPYIR SPVAPPPPPT QLKPQGQTAM 180 PAANPPSLAH VTVPSTTLAN LPQNIVPPNI NLTAPSFPSI NPTIQPPPPT TNPVISSFPN 240 ISADQMSNST SSSTSSDLEL EGRKKRKRKW KNIFDRLMKE VIQKQEVMQK KFLEAIEKRE 300 HERMVREEAW RMEEMARINK EREILAQERS IAAAKDAAVM AFLQKLSEQQ NPGHAQTNPI 360 PSQQPQPPTP QPVPAVAPAG LPVAAAVSSP APPLVPLPVV NLDVSKTENG DQSHTPSSSR 420 WPKVEIEALI KLRTSLDSKY QDSGPKGPLW EEISSAMKKL GYNRNAKRCK EKWENINKYF 480 KKVKESNKKR PEDSKTCPYF HQLDALYREK NKHDSSSNQL KPENSVPLMV RPEQQWPPPP 540 PEPAHHKQDH VMEDMESDQN RDEDDKDGDD EEEDEGDGYE IVASKTVSMG TGG

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MLGGGDTTGG DVAAAAAAAA VVTSSGARDG SSEAAAATML GSNGNNNNSG EDDRGRVDEG  60
DSSLGGNRWP RQETLALLKI RSDMDVTFRD ASVKGPLWEE VARKLAELGY HRSAKKCKEK  120
FENVYKYHKR TKDGRTAKSD GKTYRFFDQL EALENNPYIR SPVAPPPPPT QLKPQGQTAM  180
PAANPPSLAH VTVPSTTLAN LPQNIVPPNI NLTAPSFPSI NPTIQPPPPT TNPVISSFPN  240
ISADQMSNST SSSTSSDLEL EGRKKRKRKW KNIFDRLMKE VIQKQEVMQK KFLEAIEKRE  300
HERMVREEAW RMEEMARINK EREILAQERS IAAAKDAAVM AFLQKLSEQQ NPGHAQTNPI  360
PSQQPQPPTP QPVPAVAPAG LPVAAAVSSP APPLVPLPVV NLDVSKTENG DQSHTPSSSR  420
WPKVEIEALI KLRTSLDSKY QDSGPKGPLW EEISSAMKKL GYNRNAKRCK EKWENINKYF  480
KKVKESNKKR PEDSKTCPYF HQLDALYREK NKHDSSSNQL KPENSVPLMV RPEQQWPPPP  540
PEPAHHKQDH VMEDMESDQN RDEDDKDGDD EEEDEGDGYE IVASKTVSMG TGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	268	RKKRKR
2	263	269	RKKRKRK
3	264	269	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-149	Trihelix family protein