PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749883.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 591aa MW: 65718.8 Da PI: 8.338

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91	1.3e-28	65	149	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++r +k+Ckek+en+ k++k++k+g+ ++ +t+++fdqlea XP_022749883.1 65 RWPRQETLALLKIRSDMDVTFRDASVKGPLWEEVSRKLAELGYHRRAKKCKEKFENVYKYHKRTKDGRTAKSY--GKTYRFFDQLEA 149 8******************************************************************9754..456*****85 PP
2	trihelix	104.8	6.1e-33	418	503	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k e+ aLi++r+++++++++g k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a XP_022749883.1 418 RWPKVETEALIKLRTSLDSKYQDGGPKGPLWEEISSAMKKLGYNRNAKKCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 503 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MLGGSDTTGG AVAAATAMVT RSGARDGSSE AAAAAMLGSN GNNNNSGEDD RGRVDEGDRS 60 LGGNRWPRQE TLALLKIRSD MDVTFRDASV KGPLWEEVSR KLAELGYHRR AKKCKEKFEN 120 VYKYHKRTKD GRTAKSYGKT YRFFDQLEAL ENNPYIRSPV AAPLPPTQLK PQGQPAANPP 180 SLTHVTVPST TLSNLPQNVV PPNINHTAPS CPSTNPTIQP PPPTTNPTIP SFPTISADQM 240 SNSTSSSTSS DLELEGRRKR KRKWKNFFER LMKEVIRKQK GMQKKFLEAI EKCEHERMVR 300 EEAWRMQEMA RINKEREILA QERSMATAKD DAVMAFLQKL SEQQNPGHAQ TNAIPSQQPQ 360 PPAPQPVLAV APAVAPVAQP VAAAVSAPAP PLVPLPVVNL DVSKTDNGDQ SHTPSSSRWP 420 KVETEALIKL RTSLDSKYQD GGPKGPLWEE ISSAMKKLGY NRNAKKCKEK WENINKYFKK 480 VKESNKKRPE DSKTCPYFHQ LDALYREKNK HDCSSNQLKP ENSVPLMVRP EQQWPPPPPE 540 PNHHEQDHVM EDMESDQNQD EDDKEGDVEE EDEGDGYEII VSKPVSMGTG G

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MLGGSDTTGG AVAAATAMVT RSGARDGSSE AAAAAMLGSN GNNNNSGEDD RGRVDEGDRS  60
LGGNRWPRQE TLALLKIRSD MDVTFRDASV KGPLWEEVSR KLAELGYHRR AKKCKEKFEN  120
VYKYHKRTKD GRTAKSYGKT YRFFDQLEAL ENNPYIRSPV AAPLPPTQLK PQGQPAANPP  180
SLTHVTVPST TLSNLPQNVV PPNINHTAPS CPSTNPTIQP PPPTTNPTIP SFPTISADQM  240
SNSTSSSTSS DLELEGRRKR KRKWKNFFER LMKEVIRKQK GMQKKFLEAI EKCEHERMVR  300
EEAWRMQEMA RINKEREILA QERSMATAKD DAVMAFLQKL SEQQNPGHAQ TNAIPSQQPQ  360
PPAPQPVLAV APAVAPVAQP VAAAVSAPAP PLVPLPVVNL DVSKTDNGDQ SHTPSSSRWP  420
KVETEALIKL RTSLDSKYQD GGPKGPLWEE ISSAMKKLGY NRNAKKCKEK WENINKYFKK  480
VKESNKKRPE DSKTCPYFHQ LDALYREKNK HDCSSNQLKP ENSVPLMVRP EQQWPPPPPE  540
PNHHEQDHVM EDMESDQNQD EDDKEGDVEE EDEGDGYEII VSKPVSMGTG G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	262	RRKRKR
2	257	263	RRKRKRK
3	257	280	RRKRKRKWKNFFERLMKEVIRKQK
4	258	263	RKRKRK
5	258	281	RRKRKRKWKNFFERLMKEVIRKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-147	Trihelix family protein