PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750003.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 1051aa MW: 117629 Da PI: 6.5117

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.9	6.7e-22	92	193	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W++++ yr++++r++lt+GW+ Fv +++L +gD+v+F ++++ XP_022750003.1 92 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDNKWTFRHVYRGQPKRHLLTTGWSVFVGSKRLFAGDSVLFI--RDEK 183 99***************************9445444.38**********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l ++++r+ XP_022750003.1 184 VQLQLGIRRA 193 8899999997 PP
2	Auxin_resp	125.5	3.7e-41	218	300	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+Wr+L+ XP_022750003.1 218 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQ 300 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1051 aa Download sequence
MPPVGSLVVY FPQGHSEQVA ASMQKETDFI PSYPNLSSRL ICMLHNVTLH ADPETDEVYA 60 QMTLQPVNKY DKEALLASDM GLKQNRQPAE FFCKTLTASD TSTHGGFSVP RRAAEKIFPP 120 LDFSMQPPAQ ELVARDLHDN KWTFRHVYRG QPKRHLLTTG WSVFVGSKRL FAGDSVLFIR 180 DEKVQLQLGI RRANKQQPPL SSSVISSDSM HIGILAAAAH AAANNSPFTV FYNPRASPSE 240 FVIPLAKYNK AMYTQVSLGM RFRMMFETEE SGVRRYMGTI TGISDLDPVR WKNSQWRNLQ 300 VGWDESTTGE RPSRVSIWEI EPVVTPFYIC PPPFFRPRFP KQPGMPDDES DIENAFKRAM 360 PWLGDEFIMK DAPSSIFPGL SLVQWMSMQQ NNQFPAAQSG FFPSMVSSNP LHNNLSTDDP 420 SKLLNFQAPP LPSSNMQFNK GNLNQVNQLP QAPMTWPQQQ QLQQLLQTSL NQHQQQQSQQ 480 QLQQQQPQQP QSQPQPQQQQ QQQQAFLPAQ VNNRIVAPNQ ITNQNLHQPA VYSPLQQQQL 540 LTSNSQSTQT ILSANKTSYP LMSLPQDTQI QQLMEQQPNL IHRQQQQTQL QQSLSQRTQQ 600 QAQIPQLSQQ GLSEQQCQLQ LLQKLQQQQQ QQQQQSYQQL LSPAGSLLQP PTVQQQSTHQ 660 QNQPLQQLPP SQSQTQPLGS NSFSTSMLMQ PQQLSVNQPQ CQNKPLMAMR THSGLTVGDA 720 PSCSTSPSTN NCQVSPSNFL NRSQQVPSIL ATDPVVEPAR TLVQELQGKP DMQIKQDLPT 780 SKGPDQSKYK STVTDQLEAS SSGTSYCLDA ATIQHNFSLP TFLEGDVQSH PRNNLSFTAN 840 IDGFTPDTLL SRGYDSQKDL QNLLSNYGGN PRDIDTELST AAISSQSFGV PNIPFKTGCS 900 NDAAINETGV LNGGLWANQT QRMRTYTKVQ KRGSVGRSID VYRYKGYDEL RHDLARMFGI 960 EGQLEGPQSS DWKLVYVDHE NDILLVGDDP WEEFVSCVQS IKILSSAEVQ QMSLDGDLGN 1020 VAVPNQACSG TDSGNAWRGH YEDTSAASFN R

Sequence ? help Back to Top

Protein Sequence Length: 1051 aa Download sequence

MPPVGSLVVY FPQGHSEQVA ASMQKETDFI PSYPNLSSRL ICMLHNVTLH ADPETDEVYA  60
QMTLQPVNKY DKEALLASDM GLKQNRQPAE FFCKTLTASD TSTHGGFSVP RRAAEKIFPP  120
LDFSMQPPAQ ELVARDLHDN KWTFRHVYRG QPKRHLLTTG WSVFVGSKRL FAGDSVLFIR  180
DEKVQLQLGI RRANKQQPPL SSSVISSDSM HIGILAAAAH AAANNSPFTV FYNPRASPSE  240
FVIPLAKYNK AMYTQVSLGM RFRMMFETEE SGVRRYMGTI TGISDLDPVR WKNSQWRNLQ  300
VGWDESTTGE RPSRVSIWEI EPVVTPFYIC PPPFFRPRFP KQPGMPDDES DIENAFKRAM  360
PWLGDEFIMK DAPSSIFPGL SLVQWMSMQQ NNQFPAAQSG FFPSMVSSNP LHNNLSTDDP  420
SKLLNFQAPP LPSSNMQFNK GNLNQVNQLP QAPMTWPQQQ QLQQLLQTSL NQHQQQQSQQ  480
QLQQQQPQQP QSQPQPQQQQ QQQQAFLPAQ VNNRIVAPNQ ITNQNLHQPA VYSPLQQQQL  540
LTSNSQSTQT ILSANKTSYP LMSLPQDTQI QQLMEQQPNL IHRQQQQTQL QQSLSQRTQQ  600
QAQIPQLSQQ GLSEQQCQLQ LLQKLQQQQQ QQQQQSYQQL LSPAGSLLQP PTVQQQSTHQ  660
QNQPLQQLPP SQSQTQPLGS NSFSTSMLMQ PQQLSVNQPQ CQNKPLMAMR THSGLTVGDA  720
PSCSTSPSTN NCQVSPSNFL NRSQQVPSIL ATDPVVEPAR TLVQELQGKP DMQIKQDLPT  780
SKGPDQSKYK STVTDQLEAS SSGTSYCLDA ATIQHNFSLP TFLEGDVQSH PRNNLSFTAN  840
IDGFTPDTLL SRGYDSQKDL QNLLSNYGGN PRDIDTELST AAISSQSFGV PNIPFKTGCS  900
NDAAINETGV LNGGLWANQT QRMRTYTKVQ KRGSVGRSID VYRYKGYDEL RHDLARMFGI  960
EGQLEGPQSS DWKLVYVDHE NDILLVGDDP WEEFVSCVQS IKILSSAEVQ QMSLDGDLGN  1020
VAVPNQACSG TDSGNAWRGH YEDTSAASFN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein