PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750050.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 309aa MW: 35079.5 Da PI: 6.6009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k +G g W+ I+++ g++R++k+c++rw +yl XP_022750050.1 13 RGAWTASEDKILTDYIKVHGEGKWRNIPKEAGLKRCGKSCRLRWMNYL 60 89********************************************97 PP
2	Myb_DNA-binding	51.2	2.9e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022750050.1 66 RGNISSDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 111 78999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MVRSTCSKEG MNRGAWTASE DKILTDYIKV HGEGKWRNIP KEAGLKRCGK SCRLRWMNYL 60 RPDIKRGNIS SDEEDLIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNTH LSKRGQGKER 120 RPKSNHSTVE KIPITGRVDE EDPISSRVIR TKVSRCNEVL LTLNDQQHRI ENLGRNVVIS 180 PSMDANLVQN IAAEPESSDG SLHTLTTCNE ENCLNFMLDF NAEEISVSEI FASDFTKLSH 240 DLGTAQMSNV MRGVDADNHT RKTAQSHAFM LAEEMEQNWS GCDYNIQAKL DSDFGSLIAF 300 LESAEEWII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-62	MYB family protein