PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750051.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 297aa MW: 33775.9 Da PI: 6.7147

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.6e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l ++k +G g W+ +++ g++R++k+c++rw++yl XP_022750051.1 14 RGAWTALEDKILSAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.7	4.1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++++lG++ W++Ia +++ gRt++++k++w++ XP_022750051.1 67 RGNISHDEEELIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111 78999***************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MGRSPCCSKE GLNRGAWTAL EDKILSAYIK AHGEGKWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SHDEEELIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT TLGKRAKANV 120 SSPTSPEAPS SKSRHKRLTN ESQVSEPSNS PQATETKIQV IRTKATRCCS KVLVPLQPPP 180 TQDIDINKLT LQDPSELQDY LPYLTNHQEM DNTARVQSHH GTEVLDALYS HGQDFLNFGV 240 DDDQLQPRNG EFEENNDINK NLFEDPVQPL PFDEAMFKDS TMDLDSLAFL LDSDEWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	4e-63	MYB family protein