PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750089.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 286aa MW: 31543.6 Da PI: 5.687

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	120.2	1.2e-37	15	114	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCa+Ck++r+kC+++C+lap fpa+++k+f ++klFG++n++kl+++l++++r +am+s++++A+ ra+dPv G++++i++lq q++ k+el+ XP_022750089.1 15 ACAVCKYQRKKCTPNCPLAPFFPASNHKDFLDTRKLFGVRNITKLIEKLDPQQRVIAMKSIIFQANTRANDPVGGCYRIISELQTQIDWYKSELE 109 7*********************************************************************************************9 PP DUF260 96 llkee 100 l++ + XP_022750089.1 110 LVRYQ 114 99866 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MQRSAGTNIS AASQACAVCK YQRKKCTPNC PLAPFFPASN HKDFLDTRKL FGVRNITKLI 60 EKLDPQQRVI AMKSIIFQAN TRANDPVGGC YRIISELQTQ IDWYKSELEL VRYQLSICKA 120 QAAATQQQSG QQMNMMVQVV DDDQQQVNAI DDQGLEGFNM YDALSVHDHR CQGGEGNIFQ 180 DSYAASSSLS PVYNVFDPNS VKVESEASLV PLLYKRALSD VDEDIKPLLA VYDDKGAGAF 240 PLDSKGSNIQ CSDKLVSTEE IGSIRHEPKH DLKDAASLLT LTNGKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	3e-39	LBD family protein