PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022750159.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 839aa    MW: 92443 Da    PI: 6.4207
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022750159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.7e-192078357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022750159.1 20 KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                    5679*****************************************************97 PP
2START180.68.9e-571643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+ +e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++++v+s+g  g+++l 
  XP_022750159.1 164 IAEETFTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARAFGLVGLAPT-RVAEILKDRPSWFRDCRAVDVINVLSTGngGTIELL 257
                     789999****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRaellpSg+li+p+++g+s +++v+h+dl+ r+++++lr+l+
  XP_022750159.1 258 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppAANFVRAELLPSGYLIRPCEGGGSIIHIVDHIDLEPRSVPEVLRPLY 352
                     *******************************************99999*********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s++  ++kt++a+l+++++
  XP_022750159.1 353 ESSTLLAQKTTMAALRHLRQ 372
                     ***************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MMAVTSSCKE GNKIAMDNGK YVRYTPEQVE ALERLYHECP KPSSMRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQAVNR KLTAMNKLLM EENDRLQKQV SQLVYENSYF  120
RQQTQNTTLA TTDTSCESVV TSGQHHLTPQ HPPRDASPAG LLSIAEETFT EFLSKATGTA  180
VEWVQMPGMK PGPDSIGIVA ISHGCTGVAA RAFGLVGLAP TRVAEILKDR PSWFRDCRAV  240
DVINVLSTGN GGTIELLYMQ LYAPTTLAPA RDFWLLRYTS VLEDGSLVVC ERSLNNTQNG  300
PSMPPAANFV RAELLPSGYL IRPCEGGGSI IHIVDHIDLE PRSVPEVLRP LYESSTLLAQ  360
KTTMAALRHL RQISQEISQP NVTGWGRRPA ALRALSQKLS RGFNEAVNGF TDEGWSMLES  420
DGVDDVTLLV NSSPGKMMGI DLAYSNGFPS MGNAVLCAKA SMLLQNVPPA ILLRFLREHR  480
SEWADSGIDA YSAAAVKAGP RNLPVSRGGS FGGQVILPLA HTIEHEEFME VIKLENMSHY  540
REDMIMPGDI FLLQLCSGVD ENAVGTCAEL IFAPIDASFS DDAPIIPSGF RIIPLDSGMD  600
ASTPNRTLDL ASTLEVGATG NIATADNSGR CGSTKSVMTI AFQFLYEIHL QENVATMARQ  660
YVRSIIASVQ RVALALSPSR FGSHAGLLTP PGTPEAQTLA RWICQSYRCY LGVELLKHEG  720
NESILKMLWH HTNAVLCSSL KALPVFTFAN QAGLDMLETT LVALQDISLE KIFDENGRKA  780
LFAEFPQVMQ QGFMCLQGGI CLSSMGRPVS YERAVAWKVV NDEENAHCIC FMFINWSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein