PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750196.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1036aa MW: 114580 Da PI: 4.9278

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	39	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_022750196.1 39 KGQWTAEEDEILCKAVQRFKGKNWKKIAEYFK-DRTDVQCLHRWQKVL 85 799**************************9.**********986 PP
2	Myb_DNA-binding	65.6	9.2e-21	91	137	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEdel++++vk++G++ W+tIa++++ gR +kqc++rw+++l XP_022750196.1 91 KGPWSKEEDELIIELVKKFGPKKWSTIAQHLP-GRIGKQCRERWHNHL 137 79****************************.***********97 PP
3	Myb_DNA-binding	47.4	4.6e-15	143	185	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_022750196.1 143 KEAWTQEEELALIRAHQIFGNR-WAELTKFLP-GRTDNAIKNHWN 185 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1036 aa Download sequence
MEGDRTISTP SAGLSIRDGA QRMRALHGRT TGPTRRSTKG QWTAEEDEIL CKAVQRFKGK 60 NWKKIAEYFK DRTDVQCLHR WQKVLNPELV KGPWSKEEDE LIIELVKKFG PKKWSTIAQH 120 LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELALIRAHQI FGNRWAELTK FLPGRTDNAI 180 KNHWNSSVKK KLDSYIASGL LEKFQFPLIA NQCQPMPSSS SRMQSNLDNS GAKCRTEAED 240 ISECSQESTM IGCSQSASDL ANASVHTREK FHLTEMPGAA KEKNSSPAPC SEEYYPPLED 300 VNFCIPEIPC EAGYSASGDY QFGLPDVSSL EMGQESSGLP TNHTDTRETH EMMNAAFQTS 360 VGLNAPTSFL NMTTTCEKPE HMFITDDECC RVLFSEAMND GCFASENFTQ GSNMVELGGC 420 KNTSLCQASD VQISETGRTP ATQSNYHSRS ELLPTSCCQS FGFPSLLSVK DGTLMYDRES 480 SQLNGQPFGT QEQEFTMNAL DVFIYTNDDH TGLQEQSYLA KDSLKLVPVN SFGSESNSMQ 540 ACPTVDDKPN LPSGQDVGGL CYEPPRFPSL DIPFFSCDLI PSGSDMQQEY SPLGIRQLMM 600 SSMNCITPFR LWDSPSRDDS PDAMLKSAAK TFTGTPSILK KRHRDLLSPI SERRSDKKLE 660 TDMTASLTKD FSRLDVMFDE SGTGNISQVS SSEHRTISGA SFEEKENLCQ AFDGKQDNGG 720 DHTEPLDDEA QKKDSNGNNS QGDIKKEACN IDTKNKTDDD FYDKIVQRPS AVLVEHNINN 780 ILLFSPDQVG IKADRPLLAS SMRTPRNQYH KSFGAISNQG FASECLSGNA CMVVSSPTLQ 840 IKNSEGHSIA VTAVQSTNSS ATLENLVDNA GIDAAIENYN IFGETPFKRS IESPSAWKSP 900 WFINSFVPGP RVDTEITIED IGYLMSPADR SYDAIGLMKQ LSEHTAAAYA DALEVLGNET 960 PESIVKGRRS SNNPNLDKEN NQLEAVHSDL ASNIMAERRI LDFSECETPG TGTENGKSST 1020 AVRFSSPSSY LLKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1036 aa Download sequence

MEGDRTISTP SAGLSIRDGA QRMRALHGRT TGPTRRSTKG QWTAEEDEIL CKAVQRFKGK  60
NWKKIAEYFK DRTDVQCLHR WQKVLNPELV KGPWSKEEDE LIIELVKKFG PKKWSTIAQH  120
LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELALIRAHQI FGNRWAELTK FLPGRTDNAI  180
KNHWNSSVKK KLDSYIASGL LEKFQFPLIA NQCQPMPSSS SRMQSNLDNS GAKCRTEAED  240
ISECSQESTM IGCSQSASDL ANASVHTREK FHLTEMPGAA KEKNSSPAPC SEEYYPPLED  300
VNFCIPEIPC EAGYSASGDY QFGLPDVSSL EMGQESSGLP TNHTDTRETH EMMNAAFQTS  360
VGLNAPTSFL NMTTTCEKPE HMFITDDECC RVLFSEAMND GCFASENFTQ GSNMVELGGC  420
KNTSLCQASD VQISETGRTP ATQSNYHSRS ELLPTSCCQS FGFPSLLSVK DGTLMYDRES  480
SQLNGQPFGT QEQEFTMNAL DVFIYTNDDH TGLQEQSYLA KDSLKLVPVN SFGSESNSMQ  540
ACPTVDDKPN LPSGQDVGGL CYEPPRFPSL DIPFFSCDLI PSGSDMQQEY SPLGIRQLMM  600
SSMNCITPFR LWDSPSRDDS PDAMLKSAAK TFTGTPSILK KRHRDLLSPI SERRSDKKLE  660
TDMTASLTKD FSRLDVMFDE SGTGNISQVS SSEHRTISGA SFEEKENLCQ AFDGKQDNGG  720
DHTEPLDDEA QKKDSNGNNS QGDIKKEACN IDTKNKTDDD FYDKIVQRPS AVLVEHNINN  780
ILLFSPDQVG IKADRPLLAS SMRTPRNQYH KSFGAISNQG FASECLSGNA CMVVSSPTLQ  840
IKNSEGHSIA VTAVQSTNSS ATLENLVDNA GIDAAIENYN IFGETPFKRS IESPSAWKSP  900
WFINSFVPGP RVDTEITIED IGYLMSPADR SYDAIGLMKQ LSEHTAAAYA DALEVLGNET  960
PESIVKGRRS SNNPNLDKEN NQLEAVHSDL ASNIMAERRI LDFSECETPG TGTENGKSST  1020
AVRFSSPSSY LLKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein