PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022750355.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family CO-like
Protein Properties Length: 335aa    MW: 36788.2 Da    PI: 6.9958
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022750355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box27.27.9e-09443437
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                    + C+ +++  ++lfC+ ++ +lC +C +++H        H
  XP_022750355.1  4 KLCDSCKSATATLFCRADSAFLCSNCDSKIHAAnklasrH 43
                    68*****************************655555556 PP
2zf-B_box24.65.2e-084891542
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                    +C+ +e+ +++  C+ +   lC +C   +H+       H++vp+
  XP_022750355.1 48 VCEVCEQAPAHVTCKADAAALCVTCDRDIHSAnplarrHERVPV 91
                    7*****************************66899999*99986 PP
3CCT68.81.5e-23272315144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     Rea++lRY+eKrk+RkF+K+irY+sRKa+Ae RpR+KGrF+k++
  XP_022750355.1 272 REARVLRYREKRKNRKFQKTIRYASRKAYAEMRPRIKGRFAKRT 315
                     9*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MASKLCDSCK SATATLFCRA DSAFLCSNCD SKIHAANKLA SRHARVCVCE VCEQAPAHVT  60
CKADAAALCV TCDRDIHSAN PLARRHERVP VTPFYESVNS VPAVKPNGAV NFLDERYFSD  120
LDGDADVSRE EAEAASWLLP NPNHKAVESP DVNTGHYVFS GMDPYLDLDY GPVDPKMEAQ  180
EQNSSGTDGV VPVQSKSAQA PLVNDHCFDL DFTVSKPFAY AYNPRCYSHS VSSSSLDVGV  240
VPDGSAMTDI SNPCGRGAEP TQQTVQLSAA DREARVLRYR EKRKNRKFQK TIRYASRKAY  300
AEMRPRIKGR FAKRTDIQVE ADHSNMYGFG VVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.11e-147CO-like family protein