PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750433.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 516aa MW: 56505.6 Da PI: 4.8072

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34	5.1e-11	329	371	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL +++Y+k+L XP_022750433.1 329 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDTIDYLKEL 371 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MVLGANGLVW MDGEEEEDAV SSWTPNNNNN NSSSSNEIEN KEEVVTMSAA SLSTFKSMLD 60 ADWYMNPVMN QDLQIRELGF CSNQVDNNLL LHQPIDSAAS CSPSHAFPLD PSHSHPFLPP 120 KSCFSSLINV SYNSPFDNDF DFASGTSFLA QFQPNQTPNL MGFPQTQMDT PEFSSSSEFQ 180 GTRLFAGTEN ASILSGGFSG DGFGGFDGSG NALFMNRAKI SKPLEVFPLV GSQPTLFQKR 240 TGGADKLGNL DVSAMRLGGE ALEGKKRHEE GKIEEASIDM LGWNYDSDER NDDCKVEESV 300 KNGGCNSNAT STGGDQKGKK KGMPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI 360 LGDTIDYLKE LLQRINDLHN ELESTPPGSL MPPSTSFLPL TPTPPTLPCS VKEELCPSSL 420 TSPKTQTAKV EVRLREGRAV NIHMFCACRP GLLLSTMRAL DNLGLDIQQA VISCFNGFAL 480 DVFRAEQCRE GQDVLPEQIK AVLLDSAGFH GIMRLE

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MVLGANGLVW MDGEEEEDAV SSWTPNNNNN NSSSSNEIEN KEEVVTMSAA SLSTFKSMLD  60
ADWYMNPVMN QDLQIRELGF CSNQVDNNLL LHQPIDSAAS CSPSHAFPLD PSHSHPFLPP  120
KSCFSSLINV SYNSPFDNDF DFASGTSFLA QFQPNQTPNL MGFPQTQMDT PEFSSSSEFQ  180
GTRLFAGTEN ASILSGGFSG DGFGGFDGSG NALFMNRAKI SKPLEVFPLV GSQPTLFQKR  240
TGGADKLGNL DVSAMRLGGE ALEGKKRHEE GKIEEASIDM LGWNYDSDER NDDCKVEESV  300
KNGGCNSNAT STGGDQKGKK KGMPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI  360
LGDTIDYLKE LLQRINDLHN ELESTPPGSL MPPSTSFLPL TPTPPTLPCS VKEELCPSSL  420
TSPKTQTAKV EVRLREGRAV NIHMFCACRP GLLLSTMRAL DNLGLDIQQA VISCFNGFAL  480
DVFRAEQCRE GQDVLPEQIK AVLLDSAGFH GIMRLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	337	KKKGMPAKNLMAERRRRKK
2	331	338	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-137	bHLH family protein